gatY:Quickview: Difference between revisions

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|-
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!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''gatY''
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2089, b2096, JW5343, yegF''<ref name='LIB:Riley_2006'/>, yegF''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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GatY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;
Component of [[:Category:Complex:tagatose-1,6-bisphosphate aldolase 2|tagatose-1,6-bisphosphate aldolase 2]]<ref name='LIB:EcoCyc11.1'/>
D-Tagatose-1,6-bisphosphate aldolase, class II; requires GatZ subunit for full activity and stability<ref name='LIB:EcoGene'/>
|-
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit<ref name='LIB:Riley_2006'/>, B2096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YegF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GatY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2089, JW5343, yegF, b2096''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gatYZABCD|gatYZABCD]]<ref name='LIB:EcoCyc10.6'/>, OP00231
|-
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=gatY&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12419]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002278&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=gatY&loc=MG1655%3A2175226..2174372,W3110%3A2180538..2179684,REL606%3A2131341..2130487,DH10B%3A2266234..2265380,BW2952%3A2066855..2067709]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2066855&end=2067709&gene=gatY&aa=mkmyvvstkqmlnnaqrggyavpafnihnletmqvvvetaanlhapviiagtpgtfthagtenllalvsamakqyhhplaihldhhtkfddiaqkvrsgvrsvmidashlpfaqnisrvkevvdfchrfdvsveaelgqlggqeddvqvneadalytnpaqarefaeatgidslavaigtahgmyasapaldfsrlenirqwvnlplvlhgasglstkdiqqtiklgickinvatelknafsqalknyltehpeatdprdylqsaksamrdvvskviadcgcegra]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gatY+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=gatY]]&nbsp;&nbsp;


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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

gatY

Gene Synonym(s)

ECK2089, b2096, JW5343, yegF[1], yegF

Product Desc.

GatY[2][3];

Component of tagatose-1,6-bisphosphate aldolase 2[3]

D-Tagatose-1,6-bisphosphate aldolase, class II; requires GatZ subunit for full activity and stability[4]

Product Synonyms(s)

D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit[1], B2096[2][1], YegF[2][1], GatY[2][1] , ECK2089, JW5343, yegF, b2096

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gatYZABCD[2], OP00231

Regulation/Activity
Quick Links



        

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Notes

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GatY is down 6X during growth at 4C (enabled by Oleispira antarctica Cpn10/60 transgene). kbaY, gatY, fbaA and ydjI are paralogs. Crp activated.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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