citT:Quickview: Difference between revisions

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|-
|-
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
''citT''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
''ECK0605, b0612, JW0604, ybdS''<ref name='LIB:Riley_2006'/>, ybdS''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
CitT citrate DASS Transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Citrate/succinate antiporter<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''citrate:succinate antiporter<ref name='LIB:Riley_2006'/>, B0612<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbdS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CitT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0605, JW0604, ybdS, b0612''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
transcription unit(s): [[:Category:Txn_unit:citT|citT]]<ref name='LIB:EcoCyc10.6'/>
|-
|-
!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=citT&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6338]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002945&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=citT&loc=MG1655%3A645803..644340,W3110%3A645803..644340,DH10B%3A585135..583672,DH10B%3A698395..696932,REL606%3A628631..627168,BW2952%3A547100..548563]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=547100&end=548563&gene=citT&aa=mslakdniwkllaplvvmgvmflipvpdgmppqawhyfavfvamivgmilepipataisfiavticvigsnyllfdakeladpafnaqkqalkwglagfssttvwlvfgafifalgyevsglgrrialflvkfmgkrtltlgyaiviidillapftpsntartggtvfpviknlpplfksfpndpsarriggylmwmmvistslsssmfvtgaapnvlglefvskiagiqiswlqwflcflpvgvilliiapwlsyvlykpeithseevatwagdelktmgaltrrewtliglvllslglwvfgsevinatavgllavslmlalhvvpwkditrynsawntlvnlatlvvmangltrsgfidwfagtmsthlegfspnatvivlvlvfyfahylfaslsahtatmlpvilavgkgipgvpmeqlcillvlsigimgcltpyatgpgviiygcgyvkskdywrlgaifgviyismlllvgwpilamwn]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=citT+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=citT]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

citT

Gene Synonym(s)

ECK0605, b0612, JW0604, ybdS[1], ybdS

Product Desc.

CitT citrate DASS Transporter[2][3]

Citrate/succinate antiporter[4]

Product Synonyms(s)

citrate:succinate antiporter[1], B0612[2][1], YbdS[2][1], CitT[2][1] , ECK0605, JW0604, ybdS, b0612

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): citT[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


CitT is an integral membrane protein with 12 TM regions. IT (Ion Transporter) superfamily (Prakash, 2003). ST(3) structural class based on hydropathy profile (Lolkema, 2003).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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