citT:Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Bos taurus

  • ENSBTAP00000001161 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000031644 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000006144 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000035160 (score: 0.440)
  • ENSBTAP00000005040 (score: 0.374)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00003517 (score: 1.000; bootstrap: 100%)
  • WBGene00007138 (score: 0.263)
  • WBGene00003518 (score: 0.223)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000015478 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000022664 (score: 0.383)
  • ENSCAFP00000027595 (score: 0.366)
  • ENSCAFP00000004912 (score: 0.332)
  • ENSCAFP00000005317 (score: 0.328)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000000383 (score: 1.000; bootstrap: 100%)
  • ENSCINP00000019736 (score: 0.314)
  • ENSCINP00000007638 (score: 0.240)
  • ENSCINP00000017616 (score: 0.190)
  • ENSCINP00000019733 (score: 0.144)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2486 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3433 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3336 (score: 0.384)
  • ZDB-GENE-040426-2389 (score: 0.384)
  • ZDB-CDNA-040425-3750 (score: 0.383)
  • ZDB-CDNA-040425-846 (score: 0.334)
  • ZDB-CDNA-040425-845 (score: 0.334)
  • ZDB-GENE-031222-3 (score: 0.334)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000279027 (score: 1.000; bootstrap: 100%)
  • ENSP00000194130 (score: 1.000; bootstrap: 100%)
  • ENSP00000297282 (score: 0.461)
  • ENSP00000293800 (score: 0.416)
  • ENSP00000316202 (score: 0.402)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000012550 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000028937 (score: 0.446)
  • ENSMMUP00000022045 (score: 0.410)
  • ENSMMUP00000022249 (score: 0.398)
  • ENSMMUP00000021519 (score: 0.253)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000019234 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000020288 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000017491 (score: 0.438)
  • ENSMODP00000024030 (score: 0.361)
  • ENSMODP00000020748 (score: 0.097)

From Inparanoid:20070104

Mus musculus

  • MGI:1859937 (score: 1.000; bootstrap: 100%)
  • MGI:1276558 (score: 0.361)
  • MGI:3037150 (score: 0.353)
  • MGI:2149635 (score: 0.334)

From Inparanoid:20070104

Oryza gramene

  • Q768R3 (score: 1.000; bootstrap: 100%)
  • Q768R2 (score: 0.991)
  • Q6Z229 (score: 0.823)
  • Q6K4A2 (score: 0.709)
  • Q768R4 (score: 0.696)
  • Q8L801 (score: 0.668)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000023355 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000033801 (score: 0.328)
  • ENSPTRP00000014757 (score: 0.179)
  • ENSPTRP00000015222 (score: 0.159)
  • ENSPTRP00000040805 (score: 0.091)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000025843 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNR013C (score: 1.000; bootstrap: 100%)
  • YCR037C (score: 0.305)
  • YJL198W (score: 0.282)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000180927 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000179051 (score: 0.503)
  • NEWSINFRUP00000181759 (score: 0.322)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00029948001 (score: 1.000; bootstrap: 100%)
  • GSTENP00030073001 (score: 1.000; bootstrap: 100%)
  • GSTENP00029947001 (score: 0.795)
  • GSTENP00014690001 (score: 0.641)
  • GSTENP00023460001 (score: 0.394)
  • GSTENP00019703001 (score: 0.351)
  • GSTENP00009235001 (score: 0.289)
  • GSTENP00030074001 (score: 0.117)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000017162 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

E. coli O157

YBDS

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00939 Sodium:sulfate symporter transmembrane region

EcoCyc

EcoCyc:G6338

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13538

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002945

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3308

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002110

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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