kdgR:Quickview: Difference between revisions
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{| | {| id="N49aeea95a1e8d" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Standard Name | ||
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''kdgR'' | |||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1826, b1827, JW1816, yebP''<ref name='LIB:Riley_2006'/>, yebP'' | |||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Product Desc. | ||
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KdgR transcriptional repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | KdgR transcriptional repressor<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
Regulator of kdgK, kdgT, eda; possibly regulates several other genes, e.g. yjgK<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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''predicted DNA-binding transcriptional regulator<ref name='LIB:Riley_2006'/>, B1827<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YebP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdgR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1826, JW1816, yebP, b1827'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:kdgR|kdgR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:kdgR|kdgR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=kdgR&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7003]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003590&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=kdgR&loc=MG1655%3A1908123..1907332,W3110%3A1911813..1911022,DH10B%3A1998694..1997903,REL606%3A1888676..1887885,BW2952%3A1799391..1800182]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1799391&end=1800182&gene=kdgR&aa=manadldkqpdsvssvlkvfgilqalgeereigitelsqrvmmskstvyrflqtmktlgyvaqegesekysltlklfelgaralqnvdlirsadiqmrelsrltketihlgaldedsivyihkidsmynlrmysrigrrnplystaigkvllawrdrdevkqilegveykrstertitsteallpvldqvreqgygedneeqeeglrciavpvfdrfgvviaglsisfptlrfseerlqeyvamlhtaarkisaqmgyhdypf]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=kdgR+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=kdgR]] | |||
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{{Quickview_table_help}} | {{Quickview_table_help}} | ||
<protect><!--Quickview_notes--></protect> | <protect><!--Quickview_notes--></protect> | ||
Latest revision as of 21:48, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
kdgR |
|---|---|
| Gene Synonym(s) |
ECK1826, b1827, JW1816, yebP[1], yebP |
| Product Desc. |
KdgR transcriptional repressor[2][3] Regulator of kdgK, kdgT, eda; possibly regulates several other genes, e.g. yjgK[4] |
| Product Synonyms(s) |
predicted DNA-binding transcriptional regulator[1], B1827[2][1], YebP[2][1], KdgR[2][1] , ECK1826, JW1816, yebP, b1827 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
A kdgRyebQ clone conferred hypersensitivity to trimethoprim, but a yebQ-alone expression clone did not, leading the authors to conclude that overexpression of the transcriptional regulator YnfL was responsible for the Acr-S phenoptype.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.