tktA:Quickview: Difference between revisions

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{|   id="X49b026b876344" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[tktA:Gene|''tktA]]'' (synonyms: ''ECK2930, b2935, JW5478, tkt'')<ref name='LIB:Riley_2006'/>
''tktA''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[tktA:Gene_Product(s)|TktA product]]<ref name='LIB:Riley_2006'/>: transketolase 1, thiamin-binding product, B2935 product, Tkt product
''ECK2930, b2935, JW5478, tkt''<ref name='LIB:Riley_2006'/>, tkt''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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TktA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
TktA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:transketolase I|transketolase I]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:transketolase I|transketolase I]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Transketolase A; binds Zn(II)<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''transketolase 1, thiamin-binding<ref name='LIB:Riley_2006'/>, B2935<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tkt<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TktA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2930, JW5478, tkt, b2935''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:tktA|tktA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:tktA|tktA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tktA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11427]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001391&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tktA&loc=MG1655%3A3079657..3077666,W3110%3A3080291..3078300,REL606%3A2967386..2965395,DH10B%3A3174726..3172735,BW2952%3A2964814..2966805]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2964814&end=2966805&gene=tktA&aa=mssrkelanairalsmdavqkaksghpgapmgmadiaevlwrdflkhnpqnpswadrdrfvlsnghgsmliysllhltgydlpmeelknfrqlhsktpghpevgytagvetttgplgqgianavgmaiaektlaaqfnrpghdivdhytyafmgdgcmmegishevcslagtlklgkliafyddngisidghvegwftddtamrfeaygwhvirdidghdaasikraveearavtdkpsllmcktiigfgspnkagthdshgaplgdaeialtreqlgwkyapfeipseiyaqwdakeagqakesawnekfaayakaypqeaaeftrrmkgempsdfdakakefiaklqanpakiasrkasqnaieafgpllpeflggsadlapsnltlwsgskainedaagnyihygvrefgmtaiangislhggflpytstflmfveyarnavrmaalmkqrqvmvythdsiglgedgpthqpveqvaslrvtpnmstwrpcdqvesavawkygverqdgptalilsrqnlaqqerteeqlaniarggyvlkdcagqpelifiatgsevelavaayekltaegvkarvvsmpstdafdkqdaayresvlpkavtarvaveagiadywykyvglngaivgmttfgesapaellfeefgftvdnvvakakell]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tktA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tktA]]&nbsp;&nbsp;


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

tktA

Gene Synonym(s)

ECK2930, b2935, JW5478, tkt[1], tkt

Product Desc.

TktA[2][3];

Component of transketolase I[2][3]

Transketolase A; binds Zn(II)[4]

Product Synonyms(s)

transketolase 1, thiamin-binding[1], B2935[2][1], Tkt[2][1], TktA[2][1] , ECK2930, JW5478, tkt, b2935

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tktA[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Mutations affect chromosomal supercoliing.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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