osmC:Quickview: Difference between revisions
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imported>Wikientrybot Adding EcoGene Comments |
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{| | {| id="W49aeeee68307b" class=" tableEdit New_Quickview_Table" | ||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Standard Name | ||
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''osmC'' | |||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1476, b1482, JW1477''<ref name='LIB:Riley_2006'/>, JW1477'' | |||
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!align=left {{table_heading_style}} | | !align=left {{table_heading_style}} |Product Desc. | ||
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osmotically inducible peroxidase OsmC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | osmotically inducible peroxidase OsmC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
Osmotically inducible, stress-inducible membrane protein; involved in defense against oxidative compounds; required for long-term survival in stationary phase<ref name='LIB:EcoGene'/> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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''osmotically inducible, stress-inducible membrane protein<ref name='LIB:Riley_2006'/>, B1482<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OsmC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, osmotically inducible protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1476, JW1477, b1482'' | |||
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!align=left {{table_heading_style}} |Function from GO | |||
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<GO_nr /> | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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!align=left {{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:osmC|osmC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:osmC|osmC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=osmC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10680]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000673&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=osmC&loc=MG1655%3A1554649..1555080,W3110%3A1558339..1558770,DH10B%3A1645244..1645675,REL606%3A1530563..1530994,BW2952%3A1446708..1447139]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1446708&end=1447139&gene=osmC&aa=mtihkkgqahwegdikrgkgtvstesgvlnqqpygfntrfegekgtnpeeligaahaacfsmalslmlgeagftptsidttadvsldkvdagfaitkialksevavpgidastfdgiiqkakagcpvsqvlkaeitldyqlks]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=osmC+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=osmC]] | |||
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Latest revision as of 21:47, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
osmC |
|---|---|
| Gene Synonym(s) |
ECK1476, b1482, JW1477[1], JW1477 |
| Product Desc. |
osmotically inducible peroxidase OsmC[2][3] Osmotically inducible, stress-inducible membrane protein; involved in defense against oxidative compounds; required for long-term survival in stationary phase[4] |
| Product Synonyms(s) |
osmotically inducible, stress-inducible membrane protein[1], B1482[2][1], OsmC[2][1], osmotically inducible protein[2][1] , ECK1476, JW1477, b1482 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
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| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
OsmC contains a conserved CxxS redox motif. Regulated by NhaR, RcsBDC, Lrp, Hns and RpoS. Nonessential gene.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.