pspC:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>Wikientrybot
Move help links into the <above> tag inside templates.
touch
 
(12 intermediate revisions by 2 users not shown)
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.4365.V46a99dcc7419f-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4365.M49b020f74a29f-->
<!--
<!--
******************************************************************************************
******************************************************************************************
Line 24: Line 24:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  
{|   id="M49b020f74a29f" class=" tableEdit New_Quickview_Table"


|-
|-
!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
||
||
[[pspC:Gene|''pspC]]'' (synonyms: ''ECK1301, b1306, JW1299'')<ref name='LIB:Riley_2006'/>
''pspC''
|-
|-
!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
[[pspC:Gene_Product(s)|PspC product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional activator product, B1306 product, phage shock protein product
''ECK1301, b1306, JW1299''<ref name='LIB:Riley_2006'/>, JW1299''
|-
|-
!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
||
||
PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair|PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair|PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair]]<ref name='LIB:EcoCyc11.1'/>


Positive regulatory gene, cooperatively with PspB; facilitates binding of PspA to PspB; membrane protein; dimer<ref name='LIB:EcoGene'/>
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''DNA-binding transcriptional activator<ref name='LIB:Riley_2006'/>, B1306<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, phage shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1301, JW1299, b1306''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
||


|-
|-
!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:pspABCDE|pspABCDE]]<ref name='LIB:EcoCyc10.6'/>, pspABCE  
transcription unit(s): [[:Category:Txn_unit:pspABCDE|pspABCDE]]<ref name='LIB:EcoCyc10.6'/>, pspABCE  
Line 53: Line 62:
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pspC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10778]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000769&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pspC&loc=MG1655%3A1367049..1367408,W3110%3A1370739..1371098,DH10B%3A1456445..1456804,REL606%3A1367393..1367752,BW2952%3A1257898..1258257]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1257898&end=1258257&gene=pspC&aa=maginlnkklwripqqgmvrgvcagianyfdvpvklvrilvvlsiffglalftlvayiilsfaldpmpdnmafgeqlpssselldevdrelaasetrlremeryvtsdtftlrsrfrql]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pspC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pspC]]&nbsp;&nbsp;


|-class='sortbottom'
|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.4365.V46a99dcc7419f&page=4365&pagename={{FULLPAGENAMEE}}&type=1&template=Quickview_table edit table] ||
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.4365.M49b020f74a29f&page=4365&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.4365.V46a99dcc7419f-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.4365.M49b020f74a29f--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
Overexpression causes abnormal biofilm architecture.  Overexpression also reported to inhibit growth (Brown, 2003).<ref name='LIB:EcoGene'/>




Latest revision as of 21:54, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pspC

Gene Synonym(s)

ECK1301, b1306, JW1299[1], JW1299

Product Desc.

PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair[2][3];

Component of PspC transcriptional regulator; toxin of a PspC-PspB toxin-antitoxin pair[3]

Positive regulatory gene, cooperatively with PspB; facilitates binding of PspA to PspB; membrane protein; dimer[4]

Product Synonyms(s)

DNA-binding transcriptional activator[1], B1306[2][1], PspC[2][1], phage shock protein[2][1] , ECK1301, JW1299, b1306

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pspABCDE[2], pspABCE

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Overexpression causes abnormal biofilm architecture. Overexpression also reported to inhibit growth (Brown, 2003).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=pspC:Quickview&oldid=1398338"