yjiA:Evolution: Difference between revisions

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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02492 PFAM:PF02492]
[http://pfam.janelia.org/family/PF02492 PF02492 CobW/HypB/UreG, nucleotide-binding domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52540 SUPERFAMILY:52540]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13748:SF9 PTHR13748:SF9]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=90002 SUPERFAMILY:90002]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07683 PF07683  Cobalamin synthesis protein cobW C-terminal domain]
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[[EcoCyc]]
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EcoCyc:EG10021
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10021
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000018
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0020
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0014273
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:38, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000033277 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G80480 (score: 1.000; bootstrap: 100%)
  • AT1G15730 (score: 0.698)
  • AT1G26520 (score: 0.117)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000000335 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000002857 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2388 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3335 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0204544 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000016477 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000348915 (score: 1.000; bootstrap: 100%)
  • ENSP00000351418 (score: 0.987)
  • ENSP00000353295 (score: 0.975)
  • ENSP00000323433 (score: 0.972)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000021278 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003838 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:2385089 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q69IK7 (score: 1.000; bootstrap: 100%)
  • Q7XPT4 (score: 0.361)
  • Q7XAM3 (score: 0.081)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000021209 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000035891 (score: 0.088)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000021185 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000000957 (score: 0.643)
  • ENSRNOP00000034186 (score: 0.566)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNR029C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000169738 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00032660001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000003488 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YJIA

From SHIGELLACYC

E. coli O157

Z5951

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02492 CobW/HypB/UreG, nucleotide-binding domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Panther (EcoliWiki Page)

PTHR13748:SF9

Superfamily (EcoliWiki Page)

SUPERFAMILY:90002

Pfam (EcoliWiki Page)

PF07683 Cobalamin synthesis protein cobW C-terminal domain

EcoCyc

EcoCyc:EG10021

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10021

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000018

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0020

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0014273

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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