pcm:Quickview: Difference between revisions

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{|   id="P49aeef3e53d7d" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[pcm:Gene|''pcm]]'' (synonyms: ''ECK2738, b2743, JW2713'')<ref name='LIB:Riley_2006'/>
''pcm''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[pcm:Gene_Product(s)|Pcm product]]<ref name='LIB:Riley_2006'/>: L-isoaspartate protein carboxylmethyltransferase type II product, B2743 product
''ECK2738, b2743, JW2713''<ref name='LIB:Riley_2006'/>, JW2713''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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L-isoaspartate protein carboxylmethyltransferase type II<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
L-isoaspartate protein carboxylmethyltransferase type II<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Protein-L-isoaspartate O-methyltransferase, SAM-dependent; repair of isoaspartyl residues; mutant is suseptible to secondary stresses and has a competitive disadvantage in stationary phase; monomeric; overexpression confers tolerance to thermal str<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''L-isoaspartate protein carboxylmethyltransferase type II<ref name='LIB:Riley_2006'/>, B2743<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Pcm<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2738, JW2713, b2743''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:surE-pcm|surE-pcm]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:surE-pcm|surE-pcm]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=pcm&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10689]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000682&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=pcm&loc=MG1655%3A2867541..2866915,W3110%3A2868175..2867549,REL606%3A2764380..2763754,DH10B%3A2960083..2959457,BW2952%3A2752727..2753353]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2752727&end=2753353&gene=pcm&aa=mvsrrvqalldqlraqgiqdeqvlnalaavprekfvdeafeqkawdnialpigqgqtisqpymvarmtelleltpqsrvleigtgsgyqtailahlvqhvcsverikglqwqarrrlknldlhnvstrhgdgwqgwqarapfdaiivtaappeiptalmtqldeggilvlpvgeehqylkrvrrrggefiidtveavrfvplvkgela]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pcm+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=pcm]]&nbsp;&nbsp;


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{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
Pcm may work with SurE: they are co-transcribed and have addictive effects on isoaspartyl accumulation during stationary phase.  Pcm was originally thought to be required for stationary phase and heat-stress survival, but this was due to a secondary rpoS mutation.  otherPDB (P. furiosus): 1JG1.<ref name='LIB:EcoGene'/>




Latest revision as of 21:47, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

pcm

Gene Synonym(s)

ECK2738, b2743, JW2713[1], JW2713

Product Desc.

L-isoaspartate protein carboxylmethyltransferase type II[2][3]

Protein-L-isoaspartate O-methyltransferase, SAM-dependent; repair of isoaspartyl residues; mutant is suseptible to secondary stresses and has a competitive disadvantage in stationary phase; monomeric; overexpression confers tolerance to thermal str[4]

Product Synonyms(s)

L-isoaspartate protein carboxylmethyltransferase type II[1], B2743[2][1], Pcm[2][1] , ECK2738, JW2713, b2743

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): surE-pcm[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Pcm may work with SurE: they are co-transcribed and have addictive effects on isoaspartyl accumulation during stationary phase. Pcm was originally thought to be required for stationary phase and heat-stress survival, but this was due to a secondary rpoS mutation. otherPDB (P. furiosus): 1JG1.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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