tig:Quickview: Difference between revisions

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{|   id="D49b026ad6e543" class=" tableEdit New_Quickview_Table"


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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[tig:Gene|''tig]]'' (synonyms: ''ECK0430, b0436, JW0426'')<ref name='LIB:Riley_2006'/>
''tig''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[tig:Gene_Product(s)|Tig product]]<ref name='LIB:Riley_2006'/>: peptidyl-prolyl cis/trans isomerase (trigger factor) product, B0436 product
''ECK0430, b0436, JW0426''<ref name='LIB:Riley_2006'/>, JW0426''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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trigger factor; a molecular chaperone involved in cell division<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
trigger factor; a molecular chaperone involved in cell division<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Trigger factor, protein folding chaperone; also peptidyl-prolyl cis-trans isomerase; interacts with nascent polypeptide chains<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''peptidyl-prolyl cis/trans isomerase (trigger factor)<ref name='LIB:Riley_2006'/>, B0436<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tig<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0430, JW0426, b0436''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:tig|tig]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:tig|tig]]<ref name='LIB:EcoCyc10.6'/>  
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|-
!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tig&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11003]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000992&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tig&loc=MG1655%3A454357..455655,W3110%3A454357..455655,DH10B%3A393688..394986,REL606%3A425838..427136,BW2952%3A357116..358414]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=357116&end=358414&gene=tig&aa=mqvsvettqglgrrvtitiaadsietavkselvnvakkvridgfrkgkvpmnivaqrygasvrqdvlgdlmsrnfidaiikekinpagaptyvpgeyklgedftysvefevypevelqgleaievekpivevtdadvdgmldtlrkqqatwkekdgaveaedrvtidftgsvdgeefeggkasdfvlamgqgrmipgfedgikghkageeftidvtfpeeyhaenlkgkaakfainlkkveerelpeltaefikrfgvedgsveglraevrknmerelksairnrvksqaieglvkandidvpaalidseidvlrrqaaqrfggnekqalelprelfeeqakrrvvvglllgevirtnelkadeervkglieemasayedpkeviefysknkelmdnmrnvaleeqaveavlakakvtekettfnelmnqqa]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tig+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tig]]&nbsp;&nbsp;


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{{Quickview_table_help}}
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<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
dnaK and tig mutants are synthetic lethal at 30 degrees C, however, no lethal effects are observed at 23 degrees C. Overproduction of GroEL/GroES at 30 degrees C supresses synthetic lethality.<ref name='LIB:EcoGene'/>




Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

tig

Gene Synonym(s)

ECK0430, b0436, JW0426[1], JW0426

Product Desc.

trigger factor; a molecular chaperone involved in cell division[2][3]

Trigger factor, protein folding chaperone; also peptidyl-prolyl cis-trans isomerase; interacts with nascent polypeptide chains[4]

Product Synonyms(s)

peptidyl-prolyl cis/trans isomerase (trigger factor)[1], B0436[2][1], Tig[2][1] , ECK0430, JW0426, b0436

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tig[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


dnaK and tig mutants are synthetic lethal at 30 degrees C, however, no lethal effects are observed at 23 degrees C. Overproduction of GroEL/GroES at 30 degrees C supresses synthetic lethality.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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