prc:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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From ECOO157CYC  
From ECOO157CYC  


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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00595 PFAM:PF00595]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=50156 SUPERFAMILY:50156]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52096 SUPERFAMILY:52096]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00595 PF00595  PDZ domain (Also known as DHR or GLGF)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03572 PF03572  Peptidase family S41]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF11818 PF11818  C-terminal domain of tail specific protease (DUF3340)]
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[[EcoCyc]]
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EcoCyc:EG10760
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10760
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000751
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0753
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006090
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
 
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
</noinclude>
===Categories===
===Categories===
{{BacktoTop}}
{{BacktoTop}}

Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT4G17740 (score: 1.000; bootstrap: 100%)
  • AT3G57680 (score: 0.121)
  • AT5G46390 (score: 0.066)

From Inparanoid:20070104

Oryza gramene

  • Q5ZA08 (score: 1.000; bootstrap: 100%)
  • Q8S3I9 (score: 0.178)
  • Q8S3I8 (score: 0.129)
  • Q5SN67 (score: 0.114)
  • Q40067 (score: 0.104)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000049086 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

PRC

From SHIGELLACYC

E. coli O157

PRC

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:50156

Superfamily (EcoliWiki Page)

SUPERFAMILY:52096

Pfam (EcoliWiki Page)

PF00595 PDZ domain (Also known as DHR or GLGF)

Pfam (EcoliWiki Page)

PF03572 Peptidase family S41

Pfam (EcoliWiki Page)

PF11818 C-terminal domain of tail specific protease (DUF3340)

EcoCyc

EcoCyc:EG10760

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10760

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000751

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0753

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006090

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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