marC:Quickview: Difference between revisions

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{{Tab On|Quickview|marC}}{{Tab|Gene|marC}}{{Tab|Gene Product(s)|marC}}{{Tab|Expression|marC}}{{Tab|Evolution|marC}}{{Tab|On One Page|marC}}{{TabsBottom}}
{{Tab On|Quickview|marC}}{{Tab|Gene|marC}}{{Tab|Gene Product(s)|marC}}{{Tab|Expression|marC}}{{Tab|Evolution|marC}}{{Tab|On One Page|marC}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[marC:Gene|''marC]]'' (synonyms: ''ECK1522, b1529, JW1522, ydeB, ydeC, soxR'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''marC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[marC:Gene_Product(s)|MarC product]]<ref name='LIB:Riley_2006'/>: predicted transporter<ref name='LIB:Riley_2006'/>, SoxR<ref name='LIB:EcoCyc10.6'/>, YdeC<ref name='LIB:EcoCyc10.6'/>, YdeB<ref name='LIB:EcoCyc10.6'/>, MarC<ref name='LIB:EcoCyc10.6'/>, B1529<ref name='LIB:EcoCyc10.6'/>
''ECK1522, b1529, JW1522, ydeB, ydeC''<ref name='LIB:Riley_2006'/>, ydeC''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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inner membrane protein involved in multiple antibiotic resistance<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
inner membrane protein involved in multiple antibiotic resistance<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
Inner membrane protein, function unknown; not involved in antibiotic resistance<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted transporter<ref name='LIB:Riley_2006'/>, YdeC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MarC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1529<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1522, JW1522, ydeB, ydeC, b1529''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:marC|marC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:marC|marC]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=marC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11637]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001584&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=marC&loc=MG1655%3A1616932..1616267,W3110%3A1620622..1619957,DH10B%3A1706557..1705892,REL606%3A1585951..1585286,BW2952%3A1508326..1508991]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1508326&end=1508991&gene=marC&aa=mldlfkaiglglvvllplanplttvalflglagnmnsaernrqslmasvyvfaimmvayyagqlvmdtfgisipglriagglivafigfrmlfpqqkaidspeakskseeledepsaniafvplampstagpgtiamiissastvrqsstfadwvlmvapplifflvavilwgslrssgaimrlvgkggieaisrlmgfllvcmgvqfiingileiiktyh]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=marC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=marC]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
marC is not regulated by marR and marC mutations and clones do not confer antibiotic phenotypes (McDermott, 2007). marC, ychE and yhgN are paralogs. Topology mapped using protein fusions.<ref name='LIB:EcoGene'/>
 




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==References==
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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

marC

Gene Synonym(s)

ECK1522, b1529, JW1522, ydeB, ydeC[1], ydeC

Product Desc.

inner membrane protein involved in multiple antibiotic resistance[2][3]

Inner membrane protein, function unknown; not involved in antibiotic resistance[4]

Product Synonyms(s)

predicted transporter[1], YdeC[2][1], YdeB[2][1], MarC[2][1], B1529[2][1] , ECK1522, JW1522, ydeB, ydeC, b1529

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): marC[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


marC is not regulated by marR and marC mutations and clones do not confer antibiotic phenotypes (McDermott, 2007). marC, ychE and yhgN are paralogs. Topology mapped using protein fusions.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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