uspC:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[uspC:Gene|''uspC]]'' (synonyms: ''yecG, ECK1894, b1895, JW1884'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''uspC''
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!align=left {{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[uspC:Gene_Product(s)|YecG product]]<ref name='LIB:Riley_2006'/>: universal stress protein product, B1895 product, UspC product
''yecG, ECK1894, b1895, JW1884''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW1884''
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!align=left {{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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universal stress protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
universal stress protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Stress-induced protein; UV-resistance<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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UspC null mutants lack flagella and are thus completely nonmotile (Nachin et al, 2005; [[PMID:16159758]]<ref name=PMID:16159758/>). UspC null mutants also are sensitive to UV irradiation (Gustavsson et al, 2002; [[PMID:11849540]]<ref name=PMID:11849540/>)
''universal stress protein<ref name='LIB:Riley_2006'/>, B1895<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YecG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1894, JW1884, yecG, b1895''
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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UspC null mutants lack flagella and are thus completely nonmotile (Nachin et al, 2005; PMID:16159758). UspC null mutants also are sensitive to UV irradiation (Gustavsson et al, 2002; PMID:11849540)
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:uspC|uspC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:uspC|uspC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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Upregulated in response to a variety of stressors in a ppGpp dependent manner (Gustavsson et al, 2002; PMID:11849540).
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=uspC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7031]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003618&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=uspC&loc=MG1655%3A1977777..1978205,W3110%3A1981890..1982318,REL606%3A1957747..1958175,BW2952%3A1870260..1870688]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1870260&end=1870688&gene=uspC&aa=msysnilvavavtpesqqllakavsiarpvkghislitlasdpemynqlaapmledlrsvmheetqsfldkliqdagypvdktfiaygelsehilevchkhhfdlvicgnhnhsffsrascsakrviassevdvllvpltgd]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uspC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=uspC]]&nbsp;&nbsp;


 
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===Notes===
===Notes===
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==References==
==References==
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<references/>
<references/>
<ref>'''Gustavsson, N., Diez, A.A., Nystrom, T.''' 2002. The universal stress protein paralogues of ''Escherichia coli'' are co-ordinately regulated and co-operate in the defence against DNA damage. ''Mol. Microbiol.'' '''43''':107-111</ref>
<ref>'''Gustavsson, N., Diez, A.A., Nystrom, T.''' 2002. The universal stress protein paralogues of ''Escherichia coli'' are co-ordinately regulated and co-operate in the defence against DNA damage. ''Mol. Microbiol.'' '''43''':107-111</ref>


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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

uspC

Gene Synonym(s)

yecG, ECK1894, b1895, JW1884[1][2], JW1884

Product Desc.

universal stress protein[2][3]

Stress-induced protein; UV-resistance[4]

Product Synonyms(s)

universal stress protein[1], B1895[2][1], UspC[2][1], YecG[2][1] , ECK1894, JW1884, yecG, b1895

Function from GO

<GO_nr />

Knock-Out Phenotype

UspC null mutants lack flagella and are thus completely nonmotile (Nachin et al, 2005; PMID:16159758[5]). UspC null mutants also are sensitive to UV irradiation (Gustavsson et al, 2002; PMID:11849540[6])

Regulation/Expression

transcription unit(s): uspC[2]

Regulation/Activity

Upregulated in response to a variety of stressors in a ppGpp dependent manner (Gustavsson et al, 2002; PMID:11849540[6]).

Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Nachin, L et al. (2005) Differential roles of the universal stress proteins of Escherichia coli in oxidative stress resistance, adhesion, and motility. J. Bacteriol. 187 6265-72 PubMed
  6. ↑ 6.0 6.1 Gustavsson, N et al. (2002) The universal stress protein paralogues of Escherichia coli are co-ordinately regulated and co-operate in the defence against DNA damage. Mol. Microbiol. 43 107-17 PubMed

[1]


  1. ↑ Gustavsson, N., Diez, A.A., Nystrom, T. 2002. The universal stress protein paralogues of Escherichia coli are co-ordinately regulated and co-operate in the defence against DNA damage. Mol. Microbiol. 43:107-111
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