RefGenome GO Annotation Records: Difference between revisions

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Summary as of Dec 16, 2009:
 
Complete Annotation: 107
 
Partial Annotation:  35
 
No Annotations:  18
 
Total:  160
 
 
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{|  id="E488640b25e7e4"  class=" tableEdit " 
|- bgcolor = #ccccff
!|Human Gene Name &/or Entrez Gene ID!!''E. coli'' Ortholog!!Target Date!!Function Term(s)!!Process Term(s)!!Component Term(s)!!Complete Annotation According to RefGenomes?!!Complete Annotation?
|-
|
2956
|
mutS
|
Aug-06
|
2
|
3
|
2
|
yes
|
|-
|
1352
|
cyoE
|
Aug-06
|
1
|
2
|
2
|
yes
|
|-
|
2584
|
galK
|
Aug-06
|
3
|
4 (+2 under review)
|
1
|
Yes
|
|-
|
3251
|
hpt
|
Aug-06
|
2
|
3
|
1
|
Yes
|
|-
|
27235
|
ubiA
|
Aug-06
|
1
|
1
|
1
|
yes
|
|-
|
538
|
copA
|
Oct-06
|
3
|
2
|
2
|
yes
|
|-
|
540
|
copA
|
Oct-06
|
3
|
2
|
2
|
yes
|
|-
|
4719
|
nuoG
|
Feb-07
|
6
|
2
|
2
|
yes
|
|-
|
4720
|
nuoC
|
Feb-07
|
3
|
2
|
2
|
yes
|
|-
|
4728
|
nuoI
|
Feb-07
|
4
|
2
|
2
|
yes
|
|-
|
374291
|
nuoB
|
Feb-07
|
4
|
2
|
2
|
yes
|
|-
|
7915
|
gabD
|
Mar-07
|
2
|
3
|
1
|
Yes
|
|-
|
4292
|
mutL
|
Apr-07
|
1
|
1
|
1
|
yes
|
|-
|
6647
|
sodC
|
Apr-07
|
5
|
1
|
2
|
yes
|
|-
|
1807
|
ygeZ
|
May-07
|
1
|
1
|
2
|
yes
|
|-
|
7486
|
recQ
|
Jul-07
|
9
|
4
|
2
|
Yes
|
|-
|
48
|
acnA
|
Oct-07
|
3
|
4
|
1
|
Yes
|
|-
|
5834
|
glgP
|
Oct-07
|
1
|
2
|
1
|
Yes
|
|-
|
92797
|
recD (?)
|
Nov-07
|
7
|
2
|
1
|
Yes
|
|-
|
4706
|
acpP
|
Nov-07
|
3
|
4
|
1
|
Yes
|
|-
|
4723
|
nuoF
|
Nov-07
|
5
|
1
|
2
|
yes
|
|-
|
6240
|
nrdA
|
Jan-08
|
3
|
2
|
2
|
Yes
|
|-
|
6240
|
nrdE
|
Jan-08
|
4
|
2
|
2
|
Yes
|
|-
|
RRM2, RRM2B (Gene ID:6241)
|
nrdB
|
Jan-08
|
3
|
2
|
2
|
Yes
|
|-
|
50484
|
nrdB
|
Jan-08
|
3
|
2
|
2
|
Yes
|
|-
|
6470
|
glyA
|
Jan-08
|
4
|
2
|
2
|
Yes
|
|-
|
6472
|
glyA
|
Jan-08
|
4
|
2
|
2
|
Yes
|
|-
|
2805
|
aspC
|
Jan-08
|
6
|
3
|
1
|
Yes
|
|-
|
2805
|
tyrB
|
Jan-08
|
6
|
5
|
1
|
yes
|
|-
|
2806
|
aspC
|
Jan-08
|
6
|
3
|
1
|
Yes
|
|-
|
2806
|
tyrB
|
Jan-08
|
6
|
3
|
1
|
yes
|
|-
|
440
|
asnB
|
Jan-08
|
1
|
1
|
1
|
yes
|
|-
|
80150
|
iaaA
|
Jan-08
|
3
|
2
|
1
|
Yes
|
|-
|
23475
|
nadC
|
Jan-08
|
1
|
1
|
1
|
Yes
|
|-
|
84696
|
yheT
|
Feb-08
|
1
|
 
|
 
|
 
|
|-
|
171586
|
yheT
|
Feb-08
|
1
|
 
|
 
|
 
|
|-
|
79852
|
mhpC (?)
 
|
Feb-08
|
3
|
1
|
1
|
yes
|
|-
|
83451
|
ybfF (?)
|
Feb-08
|
1
|
 
|
 
|
 
|
|-
|
128
|
frmA
|
Feb-08
|
4
|
1
|
1
|
Yes
|
|-
|
131
|
frmA
|
Feb-08
|
4
|
1
|
1
|
Yes
|
|-
|
1738
|
lpd
|
Feb-08
|
4
|
6
|
1
|
Yes
|
|-
|
11315
|
yajL
|
Mar-08
|
4
|
1
|
1
|
Yes
|
|-
|
5052
|
ahpC
|
Mar-08
|
4
|
1
|
1
|
Yes
|
|-
|
7001
|
ahpC
|
Mar-08
|
4
|
1
|
1
|
Yes
|
|-
|
10935
|
ahpC
|
Mar-08
|
4
|
1
|
1
|
Yes
|
|-
|
100
|
add
|
Apr-08
|
4
|
6
|
1
|
Yes
|
|-
|
4860
|
xapA
|
Apr-08
|
2
|
2
|
1
|
Yes
|
|-
|
2395
|
cyaY
|
Apr-08
|
2
|
1
|
1
|
yes
|
|-
|
SOD2 (Gene ID:6648)
|
sodA
|
Apr-08
|
5
|
2
|
1
|
Yes
|
|-
|
6648
|
sodB
|
Apr-08
|
6
|
6
|
1
|
Yes
|
|-
|
5018
|
yidC
|
Apr-08
|
2
|
1
|
2
|
Yes
|
|-
|
6729
|
ffh
|
Apr-08
|
2
|
2
|
2
|
Yes
|
|-
|
847
|
katE
|
Apr-08
|
3
|
2
|
1
|
Yes
|
|-
|
498
|
atpA
|
Apr-08
|
1
|
1
|
1
|
Yes
|
|-
|
4508
|
atpB
|
Apr-08
|
1
|
1
|
1
|
Yes
|
|-
|
513
|
atpC
|
Apr-08
|
1
|
1
|
1
|
Yes
|
|-
|
506
|
atpD
|
Apr-08
|
1
|
1
|
1
|
Yes
|
|-
|
509
|
atpG
|
Apr-08
|
1
|
1
|
1
|
Yes
|
|-
|
539
|
atpH
|
Apr-08
|
1
|
1
|
1
|
Yes
|
|-
|
 
|
rppH
|
Apr-08
|
2
|
2
|
1
|
yes
|
|-
|
TPI1
|
tpiA
|
May-08
|
1
|
2
|
1
|
yes (12/22/08)
|
|-
|
RPS20
|
rpsJ
|
May-08
|
2
|
2
|
2
|
yes (12/22/08)
|
|-
|
MDH2
|
mdh
|
May-08
|
4
|
5
|
2
|
Yes
 
need to annotate process term for TCA cycle
|
|-
|
DNAJA3
|
dnaJ
|
May-08
|
5
|
2
|
2
|
yes
|
|-
|
RPS15A
|
rpsH
|
May-08
|
2
|
1
|
1
|
yes
|
|-
|
GALE
|
galE
|
May-08
|
1
|
4
|
1
|
Yes
|
|-
|
ADSS, ADSSL1
|
purA
|
May-08
|
1
|
4
|
1
|
Yes
|
|-
|
NFU1
|
gntY
|
May-08
|
 
|
 
|
 
|
 
|
|-
|
PPAT
|
purF
|
May-08
|
3
|
2
|
1
|
Yes
|
|-
|
GCSH
|
gcvH
|
May-08
|
1
|
1
|
1
|
Yes
|
|-
|
SDHA
|
sdhA
|
May-08
|
3
|
3
|
2
|
yes
|
|-
|
PDXK
|
pdxK
|
May-08
|
6
|
1
|
 
|
 
|
|-
|
PDXK
|
pdxY
|
May-08
|
2
|
4
|
1
|
Yes
|
|-
|
UMPS
|
pyrF
|
May-08
|
2
|
1
|
1
|
Yes
|
|-
|
UMPS
|
pyrE
|
May-08
|
3
|
1
|
1
|
Yes
|
|-
|
CYB5R4
|
fpr
|
May-08
|
2
|
2
|
1
|
Yes
|
|-
|
TARS, TARSL2
|
thrS
|
May-08
|
7
|
3
|
1
|
Yes
|
|-
|
KARS
|
lysS
|
May-08
|
2
|
3
|
1
|
Yes
|
|-
|
KARS
|
lysU
|
May-08
|
4
|
3
|
1
|
Yes
|
|-
|
CHAC1, CHAC2
|
chaC
|
May-08
|
 
|
 
|
 
|
Basic annotation completed by EcoCyc already
|
|-
|
CARS
|
cysS
|
May-08
|
7
|
1
|
 
|
 
|
|-
|
GLUD1, GLUD2
|
gdhA
|
May-08
|
1
|
1
|
1
|
Yes
|
|-
|
RPS3
|
rpsC
|
Aug-08
|
3
|
1
|
2
|
Yes (12/22/08)
|
|-
|
RPS11
|
rpsQ
|
Aug-08
|
3
|
2
|
2
|
Yes (12/22/08)
|
|-
|
RPS14
|
rpsK
|
Aug-08
|
4
|
1
|
1
|
yes (12/22/08)
|
|-
|
NDUFV2
|
nuoE
|
Sep-08
|
5
|
2
|
3
|
yes
|
|-
|
FLJ10769
|
yjeF
|
Sep-08
|
 
|
 
|
 
|
 
|
|-
|
PGAM2
|
gpmA
|
Oct-08
|
 
|
 
|
1
|
 
|
|-
|
RPUSD2
|
rluA
|
Oct-08
|
1
|
6
|
 
|
 
|
|-
|
RPUSD2
|
rluC
|
Oct-08
|
1
|
4
|
 
|
 
|
|-
|
RPUSD2
|
truC
|
Oct-08
|
1
|
4
|
 
|
 
|
|-
|
C21orf33
|
elbB
|
Nov-08
|
 
|
2
|
 
|
 
|
|-
|
C22orf28
|
rtcB (yhgL)
|
Nov-08
|
 
|
 
|
 
|
 
|
|-
|
C9orf103
|
idnK (gntV)
|
Nov-08
|
 
|
 
|
 
|
 
|
|-
|
C9orf97, OVCA2
|
yceA
|
Nov-08
|
 
|
 
|
 
|
 
|
|-
|
CEP250
|
mukB
|
Nov-08
|
6
|
4
|
1
|
Yes
|
|-
|
CUTC
|
cutC
|
Nov-08
|
 
|
3
|
 
|
 
|
|-
|
DERA
|
deoC
|
Nov-08
|
2
|
3
|
 
|
 
|
|-
|
FGGY
|
araB
|
Nov-08
|
3
|
3
|
1
|
yes
|
|-
|
C9orf103
|
gntK
|
Nov-08
|
2
|
 
|
 
|
 
|
|-
|
CLPX (GeneID: 10845)
|
P0A6H1
|
Dec-08
|
 
|
 
|
 
|
 
|
|-
|
CRYZL1
|
P28304 qor (hcz, b4051)
|
Feb-09
|
1
|
 
|
 
|
 
|
|-
|
CLPB (GeneID: 81570)
|
P63284
|
Dec-08
|
 
|
 
|
3
|
 
|
|-
|
CSP1
|
P00968 carA (pyrA, b0033)
|
Feb-09
|
5
|
3
|
2
|
Yes
|
|-
|
ALDH1A1
|
P23833 (puuC, aldH, b1300)
|
Mar-09
|
1
|
1
|
 
|
 
|
|-
|
ALDH1A1
|
P80668 (feaB, maoB, padA, ydbG, b1385)
|
Mar-09
|
4
|
4
|
 
|
 
|
|-
|
CBS
|
P0ABK5 (cysK)
|
Mar-09
|
1
|
1
|
1
|
Yes
|
|-
|
DLD
|
P0A9P0 (lpd)
|
Mar-09
|
11
|
7
|
5
|
Yes
|
|-
|
HEM1
|
P0AB77 (kbl)
|
Mar-09
|
4
|
 
|
1
|
 
|
|-
|
HEM2
|
hemB
|
Mar-09
|
1
|
1
|
1
|
Yes
|
|-
|
HEM3
|
hemC
|
Mar-09
|
1
|
3
|
1
|
Yes
|
|-
|
DCUP
|
hemE
|
Mar-09
|
2
|
3
|
 
|
 
|
|-
|
HEM6
|
hemF
|
Mar-09
|
4
|
1
|
1
|
Yes
|
|-
|
HEMH
|
hemH
|
Mar-09
|
 
|
 
|
 
|
 
|
|-
|
no human gene (ORTHOMCL7668)
|
P77671 (allB)
|
May-09
|
5
|
1
|
1
|
Yes
|
|-
|
no human gene (ORTHOMCL5480)
|
P33025 (yeiN)
|
May-09
|
1
|
 
|
1
|
 
|
|-
|
no human gene (ORTHOMCL10848)
|
P75876 (rimI, aka yccW)
|
May-09
|
2
|
2
|
 
|
 
|
|-
|
no human gene (ORTHOMCL14289)
|
P23522 (garL, aka yhaF)
|
May-09
|
3
|
3
|
1
|
Yes
|
|-
|
no human gene (ORTHOMCL14289)
|
P76469 (kdrA, aka yfaU)
|
May-09
|
4
|
1
|
1
|
Yes
|
|-
|
no human gene (ORTHOMCL18742)
|
P33919 (yejH, aka yejI, yejJ)
|
May-09
|
 
|
 
|
 
|
 
|
|-
|
no human gene (ORTHOMCL18767)
|
P37610 (tauD, aka ssiD, yaiG)
|
May-09
|
4
|
1
|
1
|
Yes
|
|-
|
no human gene (ORTHOMCL6749)
|
P46891 (cof)
|
May-09, Jun-09
|
3
|
1
|
 
|
 
|
|-
|
no human gene (ORTHOMCL6749)
|
P27848 (yigL)
|
May-09, Jun-09
|
4
|
0
|
0
|
 
|
|-
|
no human gene (ORTHOMCL6749)
|
P21829 (ybhA)
|
May-09, Jun-09
|
7
|
cellular function not known as of 7/09
|
0
|
Yes
|
Yes, as of 7/09
|-
|
no human gene (ORTHOMCL6749)
|
P0A8Y5 (yidA)
|
May-09, Jun-09
|
3
|
biological function not known as of 7/09
|
0
|
yes
|
yes, as of 7/09
|-
|
SER2 (ORTHOMCL1779)
|
P0AGB0 (serB)
|
Jun-09
|
3
|
2
|
1
|
Yes
|
|-
|
CORL2 (ORTHOMCL30548)
|
P32687 (yjbF)
|
Jun-09
|
 
|
1
|
1
|
 
|
|-
|
CORL2 (ORTHOMCL30548)
|
P75884 (gfcB)
|
Jun-09
|
 
|
 
|
 
|
 
|
|-
|
no human gene
|
P10408 (secA)
|
Jul-09
|
3
|
4
|
4
|
Yes
|
|-
|
SLC34A1 (PANTHER10010)
|
P0A9K7 (phoU)
|
Jul-09
|
 
|
1
|
 
|
 
|
|-
|
SLC34A1 (PANTHER10010)
|
P0AF43 (yjbB)
|
Jul-09
|
 
|
 
|
 
|
 
|
|-
|
prosc (PANTHER10146)
|
P67080 (yggS)
|
Jul-09
|
 
|
 
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A9X9 (cspA)
|
Jul-09
|
8
|
7
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P36995 (cspB)
|
Jul-09
|
 
|
 
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A9Y6 (cspC)
|
Jul-09
|
1
|
1
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A968 (cspD)
|
Jul-09
|
 
|
 
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A972 (cspE)
|
Jul-09
|
5
|
1
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A976 (cspF)
|
Jul-09
|
 
|
 
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A978 (cspG)
|
Jul-09
|
1
|
 
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A982 (cspH)
|
Jul-09
|
 
|
 
|
 
|
 
|
|-
|
LIN28 (PANTHER11544)
|
P0A986 (cspI)
|
Jul-09
|
 
|
 
|
 
|
 
|
|-
|
PANTHER10314 (P35520 CBS_HUMAN)
|
P0ABK5 (cysK)
|
Jul-09
|
4
|
4
|
5
|
Yes
|
|-
|
PANTHER10314 (P35520 CBS_HUMAN)
|
P16703 (cysM)
|
Jul-09
|
3
|
3
|
 
|
 
|
|-
|
PANTHER10314
|
P76316 (dcyD aka yedO)
|
Jul-09
|
3
|
3
|
 
|
 
|
|-
|
PANTHER10314
|
P00926 (dsdA)
|
Jul-09
|
3
|
1
|
1
|
Yes
|
|-
|
PANTHER10314
|
P66899 (ygeX)
|
Jul-09
|
1
|
1
|
 
|
 
|
|-
|
PANTHER10314 (Q9GZT4 SRR_HUMAN)
|
P0AGF6 (tdcB)
|
Jul-09
|
6
|
5
|
1
|
Yes
|
|-
|
PANTHER10314 (Q9GZT4 SRR_HUMAN)
|
P04968 (ilvA)
|
Jul-09
|
7
|
5
|
1
|
Yes
|
|-
|
PTHR12383
|
P00803 (lepB)
|
Aug-09
|
3
|
4
|
2
|
Yes
|
|-
|
PTHR10906
|
P0AGA2 (SecY)
|
Sept-09
|
3
|
3
|
2
|
Yes
|
|-
|
PANTHER10314 (Q86YJ6 THNS2_HUMAN; Q8IYQ7 THNS1_HUMAN)
|
P00934 (thrC)
|
Jul-09
|
3
|
2
|
 
|
 
|
|-
|
PTHR20856
|
P0A8V2 (rpoB)
|
Sept-09
|
1
|
1
|
 
|
 
|
|-
|
PANTHER10314
|
P0A877 (trpA)
|
Jul-09
|
3
|
2
|
1
|
Yes
|
|-
|
PTHR24096
|
P31552 (caiC)
|
Sept-09
|
2
|
 
|
 
|
 
|
|-
|
PANTHER10314
|
P0A879 (trpB)
|
Jul-09
|
3
|
2
|
1
|
Yes
|
|-
|
PTHR24096
|
P69451 (fadD)
|
Sept-09
|
4
|
3
|
1
|
Yes
|
|-
|
PTHR24096
|
P37353 (menE)
|
Sept-09
|
3
|
2
|
 
|
 
|
|-
|
PTHR24096
|
P31119 (aas)
|
Sept-09
|
2
|
2
|
1
|
Yes
|
|-
|
PTHR12563
|
P0A7A7 (plsB)
|
Oct-09
|
1
|
2
|
3
|
Yes
|
|-
|
PTHR20854
|
P22255  (cysQ)
|
Oct-09
|
2
|
1
|
1
|
Yes
|
|-
|
PTHR20854
|
P0ADG4 (suhB)
|
Oct-09
|
5
|
1
|
 
|
 
|
|-
|
PTHR10949
|
P60716 (lipA)
|
Oct-09
|
3
|
2
|
1
|
Yes
|
|-
|
PTHR23151
|
P06959 (aceF)
|
Oct-09
|
11
|
2
|
3
|
Yes
|
|-
|
PTHR23151
|
P0AFG6 (sucB)
|
Oct-09
|
5
|
1
|
1
|
Yes
|
|-
|
PTHR12835
|
P06709 (birA)
|
Oct-09
|
3
|
1
|
1
|
Yes
|
|-
|
PTHR11902
|
P0A6P9 (eno)
|
Oct-09
|
5
|
1
|
3
|
Yes
|
|-
|
AQP1
|
P60844 (apqZ)
|
Feb-10
|
1
|
3
|
2
|
Yes
|
|-
|
DUSP6
|
P76093 (ynbD)
|
Feb-10
|
0
|
0
|
1 (ISM)
|
No papers as of 6/24/10
|
No papers as of 6/24/10.
|-
|
TAP2
|
P77265 (mdlA)
|
Feb-10
|
 
|
 
|
 
|
 
|
|-
|
TAP2
|
P60752 (msbA)
|
Feb-10
|
7
|
1
|
2
|
Yes
|
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.135136.E488640b25e7e4&page=135136&pagename={{FULLPAGENAMEE}}&type=0&template= edit table]</span> || || || || || || ||
|}
<!--box uid=63ce1649aab8b3180235b0af7618f667.135136.E488640b25e7e4--></protect>

Latest revision as of 21:37, 29 June 2010

Summary as of Dec 16, 2009:

Complete Annotation: 107

Partial Annotation: 35

No Annotations: 18

Total: 160


Human Gene Name &/or Entrez Gene ID E. coli Ortholog Target Date Function Term(s) Process Term(s) Component Term(s) Complete Annotation According to RefGenomes? Complete Annotation?

2956

mutS

Aug-06

2

3

2

yes

1352

cyoE

Aug-06

1

2

2

yes

2584

galK

Aug-06

3

4 (+2 under review)

1

Yes

3251

hpt

Aug-06

2

3

1

Yes

27235

ubiA

Aug-06

1

1

1

yes

538

copA

Oct-06

3

2

2

yes

540

copA

Oct-06

3

2

2

yes

4719

nuoG

Feb-07

6

2

2

yes

4720

nuoC

Feb-07

3

2

2

yes

4728

nuoI

Feb-07

4

2

2

yes

374291

nuoB

Feb-07

4

2

2

yes

7915

gabD

Mar-07

2

3

1

Yes

4292

mutL

Apr-07

1

1

1

yes

6647

sodC

Apr-07

5

1

2

yes

1807

ygeZ

May-07

1

1

2

yes

7486

recQ

Jul-07

9

4

2

Yes

48

acnA

Oct-07

3

4

1

Yes

5834

glgP

Oct-07

1

2

1

Yes

92797

recD (?)

Nov-07

7

2

1

Yes

4706

acpP

Nov-07

3

4

1

Yes

4723

nuoF

Nov-07

5

1

2

yes

6240

nrdA

Jan-08

3

2

2

Yes

6240

nrdE

Jan-08

4

2

2

Yes

RRM2, RRM2B (Gene ID:6241)

nrdB

Jan-08

3

2

2

Yes

50484

nrdB

Jan-08

3

2

2

Yes

6470

glyA

Jan-08

4

2

2

Yes

6472

glyA

Jan-08

4

2

2

Yes

2805

aspC

Jan-08

6

3

1

Yes

2805

tyrB

Jan-08

6

5

1

yes

2806

aspC

Jan-08

6

3

1

Yes

2806

tyrB

Jan-08

6

3

1

yes

440

asnB

Jan-08

1

1

1

yes

80150

iaaA

Jan-08

3

2

1

Yes

23475

nadC

Jan-08

1

1

1

Yes

84696

yheT

Feb-08

1

171586

yheT

Feb-08

1

79852

mhpC (?)

Feb-08

3

1

1

yes

83451

ybfF (?)

Feb-08

1

128

frmA

Feb-08

4

1

1

Yes

131

frmA

Feb-08

4

1

1

Yes

1738

lpd

Feb-08

4

6

1

Yes

11315

yajL

Mar-08

4

1

1

Yes

5052

ahpC

Mar-08

4

1

1

Yes

7001

ahpC

Mar-08

4

1

1

Yes

10935

ahpC

Mar-08

4

1

1

Yes

100

add

Apr-08

4

6

1

Yes

4860

xapA

Apr-08

2

2

1

Yes

2395

cyaY

Apr-08

2

1

1

yes

SOD2 (Gene ID:6648)

sodA

Apr-08

5

2

1

Yes

6648

sodB

Apr-08

6

6

1

Yes

5018

yidC

Apr-08

2

1

2

Yes

6729

ffh

Apr-08

2

2

2

Yes

847

katE

Apr-08

3

2

1

Yes

498

atpA

Apr-08

1

1

1

Yes

4508

atpB

Apr-08

1

1

1

Yes

513

atpC

Apr-08

1

1

1

Yes

506

atpD

Apr-08

1

1

1

Yes

509

atpG

Apr-08

1

1

1

Yes

539

atpH

Apr-08

1

1

1

Yes

rppH

Apr-08

2

2

1

yes

TPI1

tpiA

May-08

1

2

1

yes (12/22/08)

RPS20

rpsJ

May-08

2

2

2

yes (12/22/08)

MDH2

mdh

May-08

4

5

2

Yes

need to annotate process term for TCA cycle

DNAJA3

dnaJ

May-08

5

2

2

yes

RPS15A

rpsH

May-08

2

1

1

yes

GALE

galE

May-08

1

4

1

Yes

ADSS, ADSSL1

purA

May-08

1

4

1

Yes

NFU1

gntY

May-08

PPAT

purF

May-08

3

2

1

Yes

GCSH

gcvH

May-08

1

1

1

Yes

SDHA

sdhA

May-08

3

3

2

yes

PDXK

pdxK

May-08

6

1

PDXK

pdxY

May-08

2

4

1

Yes

UMPS

pyrF

May-08

2

1

1

Yes

UMPS

pyrE

May-08

3

1

1

Yes

CYB5R4

fpr

May-08

2

2

1

Yes

TARS, TARSL2

thrS

May-08

7

3

1

Yes

KARS

lysS

May-08

2

3

1

Yes

KARS

lysU

May-08

4

3

1

Yes

CHAC1, CHAC2

chaC

May-08

Basic annotation completed by EcoCyc already

CARS

cysS

May-08

7

1

GLUD1, GLUD2

gdhA

May-08

1

1

1

Yes

RPS3

rpsC

Aug-08

3

1

2

Yes (12/22/08)

RPS11

rpsQ

Aug-08

3

2

2

Yes (12/22/08)

RPS14

rpsK

Aug-08

4

1

1

yes (12/22/08)

NDUFV2

nuoE

Sep-08

5

2

3

yes

FLJ10769

yjeF

Sep-08

PGAM2

gpmA

Oct-08

1

RPUSD2

rluA

Oct-08

1

6

RPUSD2

rluC

Oct-08

1

4

RPUSD2

truC

Oct-08

1

4

C21orf33

elbB

Nov-08

2

C22orf28

rtcB (yhgL)

Nov-08

C9orf103

idnK (gntV)

Nov-08

C9orf97, OVCA2

yceA

Nov-08

CEP250

mukB

Nov-08

6

4

1

Yes

CUTC

cutC

Nov-08

3

DERA

deoC

Nov-08

2

3

FGGY

araB

Nov-08

3

3

1

yes

C9orf103

gntK

Nov-08

2

CLPX (GeneID: 10845)

P0A6H1

Dec-08

CRYZL1

P28304 qor (hcz, b4051)

Feb-09

1

CLPB (GeneID: 81570)

P63284

Dec-08

3

CSP1

P00968 carA (pyrA, b0033)

Feb-09

5

3

2

Yes

ALDH1A1

P23833 (puuC, aldH, b1300)

Mar-09

1

1

ALDH1A1

P80668 (feaB, maoB, padA, ydbG, b1385)

Mar-09

4

4

CBS

P0ABK5 (cysK)

Mar-09

1

1

1

Yes

DLD

P0A9P0 (lpd)

Mar-09

11

7

5

Yes

HEM1

P0AB77 (kbl)

Mar-09

4

1

HEM2

hemB

Mar-09

1

1

1

Yes

HEM3

hemC

Mar-09

1

3

1

Yes

DCUP

hemE

Mar-09

2

3

HEM6

hemF

Mar-09

4

1

1

Yes

HEMH

hemH

Mar-09

no human gene (ORTHOMCL7668)

P77671 (allB)

May-09

5

1

1

Yes

no human gene (ORTHOMCL5480)

P33025 (yeiN)

May-09

1

1

no human gene (ORTHOMCL10848)

P75876 (rimI, aka yccW)

May-09

2

2

no human gene (ORTHOMCL14289)

P23522 (garL, aka yhaF)

May-09

3

3

1

Yes

no human gene (ORTHOMCL14289)

P76469 (kdrA, aka yfaU)

May-09

4

1

1

Yes

no human gene (ORTHOMCL18742)

P33919 (yejH, aka yejI, yejJ)

May-09

no human gene (ORTHOMCL18767)

P37610 (tauD, aka ssiD, yaiG)

May-09

4

1

1

Yes

no human gene (ORTHOMCL6749)

P46891 (cof)

May-09, Jun-09

3

1

no human gene (ORTHOMCL6749)

P27848 (yigL)

May-09, Jun-09

4

0

0

no human gene (ORTHOMCL6749)

P21829 (ybhA)

May-09, Jun-09

7

cellular function not known as of 7/09

0

Yes

Yes, as of 7/09

no human gene (ORTHOMCL6749)

P0A8Y5 (yidA)

May-09, Jun-09

3

biological function not known as of 7/09

0

yes

yes, as of 7/09

SER2 (ORTHOMCL1779)

P0AGB0 (serB)

Jun-09

3

2

1

Yes

CORL2 (ORTHOMCL30548)

P32687 (yjbF)

Jun-09

1

1

CORL2 (ORTHOMCL30548)

P75884 (gfcB)

Jun-09

no human gene

P10408 (secA)

Jul-09

3

4

4

Yes

SLC34A1 (PANTHER10010)

P0A9K7 (phoU)

Jul-09

1

SLC34A1 (PANTHER10010)

P0AF43 (yjbB)

Jul-09

prosc (PANTHER10146)

P67080 (yggS)

Jul-09

LIN28 (PANTHER11544)

P0A9X9 (cspA)

Jul-09

8

7

LIN28 (PANTHER11544)

P36995 (cspB)

Jul-09

LIN28 (PANTHER11544)

P0A9Y6 (cspC)

Jul-09

1

1

LIN28 (PANTHER11544)

P0A968 (cspD)

Jul-09

LIN28 (PANTHER11544)

P0A972 (cspE)

Jul-09

5

1

LIN28 (PANTHER11544)

P0A976 (cspF)

Jul-09

LIN28 (PANTHER11544)

P0A978 (cspG)

Jul-09

1

LIN28 (PANTHER11544)

P0A982 (cspH)

Jul-09

LIN28 (PANTHER11544)

P0A986 (cspI)

Jul-09

PANTHER10314 (P35520 CBS_HUMAN)

P0ABK5 (cysK)

Jul-09

4

4

5

Yes

PANTHER10314 (P35520 CBS_HUMAN)

P16703 (cysM)

Jul-09

3

3

PANTHER10314

P76316 (dcyD aka yedO)

Jul-09

3

3

PANTHER10314

P00926 (dsdA)

Jul-09

3

1

1

Yes

PANTHER10314

P66899 (ygeX)

Jul-09

1

1

PANTHER10314 (Q9GZT4 SRR_HUMAN)

P0AGF6 (tdcB)

Jul-09

6

5

1

Yes

PANTHER10314 (Q9GZT4 SRR_HUMAN)

P04968 (ilvA)

Jul-09

7

5

1

Yes

PTHR12383

P00803 (lepB)

Aug-09

3

4

2

Yes

PTHR10906

P0AGA2 (SecY)

Sept-09

3

3

2

Yes

PANTHER10314 (Q86YJ6 THNS2_HUMAN; Q8IYQ7 THNS1_HUMAN)

P00934 (thrC)

Jul-09

3

2

PTHR20856

P0A8V2 (rpoB)

Sept-09

1

1

PANTHER10314

P0A877 (trpA)

Jul-09

3

2

1

Yes

PTHR24096

P31552 (caiC)

Sept-09

2

PANTHER10314

P0A879 (trpB)

Jul-09

3

2

1

Yes

PTHR24096

P69451 (fadD)

Sept-09

4

3

1

Yes

PTHR24096

P37353 (menE)

Sept-09

3

2

PTHR24096

P31119 (aas)

Sept-09

2

2

1

Yes

PTHR12563

P0A7A7 (plsB)

Oct-09

1

2

3

Yes

PTHR20854

P22255 (cysQ)

Oct-09

2

1

1

Yes

PTHR20854

P0ADG4 (suhB)

Oct-09

5

1

PTHR10949

P60716 (lipA)

Oct-09

3

2

1

Yes

PTHR23151

P06959 (aceF)

Oct-09

11

2

3

Yes

PTHR23151

P0AFG6 (sucB)

Oct-09

5

1

1

Yes

PTHR12835

P06709 (birA)

Oct-09

3

1

1

Yes

PTHR11902

P0A6P9 (eno)

Oct-09

5

1

3

Yes

AQP1

P60844 (apqZ)

Feb-10

1

3

2

Yes

DUSP6

P76093 (ynbD)

Feb-10

0

0

1 (ISM)

No papers as of 6/24/10

No papers as of 6/24/10.

TAP2

P77265 (mdlA)

Feb-10

TAP2

P60752 (msbA)

Feb-10

7

1

2

Yes


edit table
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