fbp:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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''Apis mellifera''   
''Apis mellifera''   
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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''Bos taurus''   
''Bos taurus''   
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''Caenorhabditis briggsae''   
''Caenorhabditis briggsae''   
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''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
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''Canis familiaris''   
''Canis familiaris''   
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''Danio rerio''   
''Danio rerio''   
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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''Drosophila pseudoobscura''   
''Drosophila pseudoobscura''   
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''Gallus gallus''   
''Gallus gallus''   
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''Homo sapiens''   
''Homo sapiens''   
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''Macaca mulatta''   
''Macaca mulatta''   
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''Monodelphis domestica''   
''Monodelphis domestica''   
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''Mus musculus''   
''Mus musculus''   
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''Oryza gramene''   
''Oryza gramene''   
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''Pan troglodytes''   
''Pan troglodytes''   
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''Rattus norvegicus''   
''Rattus norvegicus''   
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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''Takifugu rubripes''   
''Takifugu rubripes''   
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''Tetraodon nigroviridis''   
''Tetraodon nigroviridis''   
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00316 PF00316  Fructose-1-6-bisphosphatase]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00316 PFAM:PF00316]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=56655 SUPERFAMILY:56655]
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[[EcoCyc]]
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EcoCyc:EG10283
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10283
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000277
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0279
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013842
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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{{RefHelp}}
<references/>
<references />
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===Categories===
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Latest revision as of 08:38, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000016841 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000022879 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G43670 (score: 1.000; bootstrap: 98%)
  • AT3G54050 (score: 0.105)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000012835 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000026056 (score: 0.629)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00026892 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00001404 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000001871 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040822-23 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040822-23 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1587 (score: 0.560)
  • ZDB-GENE-030131-7171 (score: 0.560)
  • ZDB-CDNA-040425-3092 (score: 0.541)
  • ZDB-GENE-021206-11 (score: 0.541)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0216231 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0032820 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA16400-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000020563 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000020562 (score: 0.647)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000253266 (score: 1.000; bootstrap: 100%)
  • ENSP00000253269 (score: 0.641)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000029667 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000029668 (score: 0.342)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003412 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000003429 (score: 0.664)

From Inparanoid:20070104

Mus musculus

  • MGI:95491 (score: 1.000; bootstrap: 100%)
  • MGI:95492 (score: 0.613)

From Inparanoid:20070104

Oryza gramene

  • O64421 (score: 1.000; bootstrap: 99%)
  • Q5N9E2 (score: 1.000; bootstrap: 99%)
  • Q9SDL8 (score: 0.997)
  • Q43139 (score: 0.851)
  • Q75HX2 (score: 0.813)
  • Q94JN1 (score: 0.154)
  • P09195 (score: 0.119)
  • Q7G5R1 (score: 0.109)
  • O64422 (score: 0.109)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000036128 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000023865 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000023685 (score: 0.339)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YLR377C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC11984c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000139771 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000168356 (score: 0.515)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00025164001 (score: 1.000; bootstrap: 100%)
  • GSTENP00029094001 (score: 0.719)
  • GSTENP00029093001 (score: 0.552)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000038177 (score: 1.000; bootstrap: 71%)
  • ENSXETP00000038182 (score: 0.435)
  • ENSXETP00000005220 (score: 0.415)
  • ENSXETP00000005238 (score: 0.373)

From Inparanoid:20070104

Shigella flexneri

FBP

From SHIGELLACYC

E. coli O157

FBP

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00316 Fructose-1-6-bisphosphatase

Superfamily (EcoliWiki Page)

SUPERFAMILY:56655

EcoCyc

EcoCyc:EG10283

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10283

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000277

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0279

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013842

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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