glpK:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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''Apis mellifera''   
''Apis mellifera''   
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From Inparanoid:20070104  
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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From Inparanoid:20070104  
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''Bos taurus''   
''Bos taurus''   
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''Caenorhabditis briggsae''   
''Caenorhabditis briggsae''   
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''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
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''Canis familiaris''   
''Canis familiaris''   
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''Ciona intestinalis''   
''Ciona intestinalis''   
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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''Drosophila pseudoobscura''   
''Drosophila pseudoobscura''   
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''Gallus gallus''   
''Gallus gallus''   
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''Homo sapiens''   
''Homo sapiens''   
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''Macaca mulatta''   
''Macaca mulatta''   
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''Monodelphis domestica''   
''Monodelphis domestica''   
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''Mus musculus''   
''Mus musculus''   
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''Pan troglodytes''   
''Pan troglodytes''   
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''Rattus norvegicus''   
''Rattus norvegicus''   
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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''Takifugu rubripes''   
''Takifugu rubripes''   
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''Tetraodon nigroviridis''   
''Tetraodon nigroviridis''   
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00370 PF00370  FGGY family of carbohydrate kinases, N-terminal domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02782 PF02782  FGGY family of carbohydrate kinases, C-terminal domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53067 SUPERFAMILY:53067]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00370 PFAM:PF00370]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=53067 SUPERFAMILY:53067]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10196:SF9 PTHR10196:SF9]
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[[EcoCyc]]
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EcoCyc:EG10398
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10398
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000391
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0393
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0012825
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
{{RefHelp}}
<references/>
<references />
<noinclude>
__NOTOC__
__NOTOC__
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===Categories===
===Categories===
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Latest revision as of 08:37, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000018137 (score: 1.000; bootstrap: 98%)
  • ENSANGP00000020314 (score: 0.144)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000004685 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G80460 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000030898 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000000378 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00037874 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00020007 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000020225 (score: 1.000; bootstrap: 99%)
  • ENSCAFP00000013019 (score: 0.772)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000012436 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0218222 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0025592 (score: 1.000; bootstrap: 99%)
  • FBgn0035266 (score: 0.092)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA14911-PA (score: 1.000; bootstrap: 98%)
  • GA20751-PA (score: 0.102)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000026206 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000302036 (score: 1.000; bootstrap: 100%)
  • ENSP00000354642 (score: 0.880)
  • ENSP00000350624 (score: 0.830)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000031343 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000022823 (score: 0.802)
  • ENSMMUP00000007837 (score: 0.571)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000018135 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000002944 (score: 0.828)

From Inparanoid:20070104

Mus musculus

  • MGI:106594 (score: 1.000; bootstrap: 99%)
  • MGI:1329027 (score: 0.767)
  • MGI:891990 (score: 0.744)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000040915 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000028445 (score: 0.784)
  • ENSPTRP00000037327 (score: 0.237)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000045775 (score: 1.000; bootstrap: 99%)
  • ENSRNOP00000047647 (score: 0.714)
  • ENSRNOP00000043080 (score: 0.630)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YHL032C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCPJ7322c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000163684 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000136236 (score: 0.109)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00033107001 (score: 1.000; bootstrap: 100%)
  • GSTENP00019440001 (score: 0.198)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000040298 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

GLPK

From SHIGELLACYC

E. coli O157

GLPK

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00370 FGGY family of carbohydrate kinases, N-terminal domain

Pfam (EcoliWiki Page)

PF02782 FGGY family of carbohydrate kinases, C-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:53067

Superfamily (EcoliWiki Page)

SUPERFAMILY:53067

Panther (EcoliWiki Page)

PTHR10196:SF9

EcoCyc

EcoCyc:EG10398

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10398

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000391

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0393

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0012825

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

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