ubiE:Quickview: Difference between revisions

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{|   id="O49b0279ec1479"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ubiE:Gene|''ubiE]]'' (synonyms: ''ECK3827, b3833, JW5581, yigO'')<ref name='LIB:Riley_2006'/>
''ubiE''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ubiE:Gene_Product(s)|UbiE product]]<ref name='LIB:Riley_2006'/>: bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase product, B3833 product, YigO product
''ECK3827, b3833, JW5581, yigO''<ref name='LIB:Riley_2006'/>, menG, menH, yigO''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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2-OCTAPRENYL-METHOXY-BENZOQ-METH-MONOMER<ref name='LIB:EcoCyc10.6'/> bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase<ref name='LIB:EcoCyc11.1'/>  
2-OCTAPRENYL-METHOXY-BENZOQ-METH<ref name='LIB:EcoCyc10.6'/>; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase<ref name='LIB:EcoCyc11.1'/>


Ubiquinone/menaquinone biosynthesis methyltransferase; SAM-dependent; (1) Ubiqinone synthesis, 2-octaprenyl-6-methoxy-1,4-benzoquinone methyltransferase; (2) Menaquinone synthesis, 2-demethylmenaquinone (DMK) methyltransferase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase<ref name='LIB:Riley_2006'/>, B3833<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YigO<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UbiE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3827, JW5581, menG, menH, yigO, b3833''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ubiE-yigP-ubiB|ubiE-yigP-ubiB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ubiE-yigP-ubiB|ubiE-yigP-ubiB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ubiE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11473]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001435&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ubiE&loc=MG1655%3A4016878..4017633,W3110%3A3617826..3617071,REL606%3A3997326..3998081,DH10B%3A4115798..4116553,BW2952%3A3906547..3907302]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3906547&end=3907302&gene=ubiE&aa=mvdksqetthfgfqtvakeqkadmvahvfhsvaskydvmndlmsfgihrlwkrftidcsgvrrgqtvldlaggtgdltakfsrlvgetgkvvladinesmlkmgreklrnigvignveyvqanaealpfpdntfdcitisfglrnvtdkdkalrsmyrvlkpggrllvlefskpiieplskaydaysfhvlprigslvandadsyrylaesirmhpdqdtlkammqdagfesvdyynltagvvalhrgykf]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ubiE+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ubiE]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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UbiE is the closest E. coli homolog to B. stearothermophilus MenG (MenH, SP O86169). ubiE mutants accumulate DMK, not MK. rraA (menG) does not encode a methyltransferase. Binds TrxA (Kumar, 2004).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:45, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ubiE

Gene Synonym(s)

ECK3827, b3833, JW5581, yigO[1], menG, menH, yigO

Product Desc.

2-OCTAPRENYL-METHOXY-BENZOQ-METH[2]; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase[3]

Ubiquinone/menaquinone biosynthesis methyltransferase; SAM-dependent; (1) Ubiqinone synthesis, 2-octaprenyl-6-methoxy-1,4-benzoquinone methyltransferase; (2) Menaquinone synthesis, 2-demethylmenaquinone (DMK) methyltransferase[4]

Product Synonyms(s)

bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase[1], B3833[2][1], YigO[2][1], UbiE[2][1] , ECK3827, JW5581, menG, menH, yigO, b3833

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ubiE-yigP-ubiB[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


UbiE is the closest E. coli homolog to B. stearothermophilus MenG (MenH, SP O86169). ubiE mutants accumulate DMK, not MK. rraA (menG) does not encode a methyltransferase. Binds TrxA (Kumar, 2004).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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