rssB:Quickview: Difference between revisions

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{|   id="P49b0240d235ec"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rssB:Gene|''rssB]]'' (synonyms: ''ECK1230, b1235, JW1223, hnr, mviA, sprE, ychI, ychL'')<ref name='LIB:Riley_2006'/>
''rssB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rssB:Gene_Product(s)|RssB product, RssB product]]<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>: B1235 product, SprE product, YchL product, Hnr product
''ECK1230, b1235, JW1223, hnr, mviA, sprE, ychI, ychL''<ref name='LIB:Riley_2006'/>, verA, ychL''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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regulator of RpoS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
regulator of RpoS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Two-component response regulator, affecting RpoS regulon; anti-RpoS activity, phosphorylated form binds to RpoS and initiates proteolysis by ClpXP<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''B1235<ref name='LIB:EcoCyc10.6'/>, SprE<ref name='LIB:EcoCyc10.6'/>, YchL<ref name='LIB:EcoCyc10.6'/>, Hnr<ref name='LIB:EcoCyc10.6'/> , ECK1230, hnr, JW1223, mviA, sprE, verA, ychL, b1235''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rssAB|rssAB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rssB|rssB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rssAB|rssAB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rssB|rssB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rssB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12121]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002024&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rssB&loc=MG1655%3A1289465..1290478,W3110%3A1291819..1292832,DH10B%3A1329706..1330719,REL606%3A1290036..1291049,BW2952%3A1179050..1179976]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1179050&end=1179976&gene=rssB&aa=mtqplvgkqilivedeqvfrslldswfsslgattvlaadgvdalellggftpdlmicdiamprmnglkllehirnrgdqtpvlvisatenmadiakalrlgvedvllkpvkdlnrlremvfaclypsmfnsrveeeerlfrdwdamvdnpaaaakllqelqppvqqvishcrvnyrqlvaadkpglvldiaalsendlafycldvtraghngvlaalllralfngllqeqlahqnqrlpelgallkqvnhllrqanlpgqfpllvgyyhrelknlilvsaglnatlntgehqvqisngvplgtlgnaylnqlsqrcdawqcqiwgtggrlrlmlsae]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rssB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rssB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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A yliE rssB9(hnr) double null mutant has significantly increased lycopene production in 1X M9; the effect may be salt-suppressible as it is not seen in 2X M9 (Alper, 2008).<ref name='LIB:EcoGene'/>




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==References==
==References==
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<references/>
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rssB

Gene Synonym(s)

ECK1230, b1235, JW1223, hnr, mviA, sprE, ychI, ychL[1], verA, ychL

Product Desc.

regulator of RpoS[2][3]

Two-component response regulator, affecting RpoS regulon; anti-RpoS activity, phosphorylated form binds to RpoS and initiates proteolysis by ClpXP[4]

Product Synonyms(s)

B1235[2], SprE[2], YchL[2], Hnr[2] , ECK1230, hnr, JW1223, mviA, sprE, verA, ychL, b1235

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rssAB[2], rssB[2]

Regulation/Activity
Quick Links



        

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Notes

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A yliE rssB9(hnr) double null mutant has significantly increased lycopene production in 1X M9; the effect may be salt-suppressible as it is not seen in 2X M9 (Alper, 2008).[4]



References

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  1. ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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