dpiB:Quickview: Difference between revisions

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{|   id="B49aee416928fc"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[dpiB:Gene|''dpiB]]'' (synonyms: ''citA, ECK0612, b0619, JW0611, ybeP, cit, mpdB'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''dpiB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[dpiB:Gene_Product(s)|CitA product]]<ref name='LIB:Riley_2006'/>: sensory histidine kinase in two-component regulatory system with citB product, B0619 product, MpdB product, YbeP product, DpiB product
''citA, ECK0612, b0619, JW0611, ybeP, cit, mpdB''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>, mpdB''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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sensory histidine kinase in two-component regulatory system with CitB<ref name='LIB:EcoCyc10.6'/> sensory histidine kinase in two-component regulatory system with DpiA<ref name='LIB:EcoCyc11.1'/>  
sensory histidine kinase in two-component regulatory system with CitB<ref name='LIB:EcoCyc10.6'/>; sensory histidine kinase in two-component regulatory system with DpiA<ref name='LIB:EcoCyc11.1'/>


Two-component system histidine protein kinase; DpiA is cognate sensor; regulates citCDEFXGT operon; represses appY; periplasmic domain functions as a high-affinity citrate receptor; destabilizes plasmid inheritance<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''sensory histidine kinase in two-component regulatory system with citB<ref name='LIB:Riley_2006'/>, B0619<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MpdB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbeP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DpiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CitA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , citA, ECK0612, JW0611, mpdB, ybeP, b0619''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:citA|citA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:citA|citA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dpiB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6345]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002952&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dpiB&loc=MG1655%3A651458..653116,W3110%3A651458..653116,REL606%3A634823..636481,BW2952%3A554218..555876]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=554218&end=555876&gene=dpiB&aa=mlqlnenkqfaffqrlafplrifllilvfsifviaalaqyftasfedyltlhvrdmamnqakiiasndsvisavktrdykrlatianklqrdtdfdyvvigdrhsirlyhpnpekigypmqftkqgalekgesyfitgkgsmgmamraktpifdddgkvigvvsigylvskidswraefllpmagvfvvllgilmllswflaahirrqmmgmepkqiarvvrqqealfssvyegliavdphgyitainrnarkmlglsspgrqwlgkpivevvrpadffteqidekrqdvvanfnglsvianreairsgddllgaiisfrskdeistlnaqltqikqyveslrtlrhehlnwmstlngllqmkeydrvlamvqgesqaqqqlidslreafadrqvagllfgkvqrarelglkmiivpgsqlsqlppgldstefaaivgnlldnafeaslrsdegnkivelflsdegddvvievadqgcgvpeslrdkifeqgvstradepgehgiglyliasyvtrcggvitledndpcgtlfsiyipkvkpndssinpidr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dpiB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dpiB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:51, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

dpiB

Gene Synonym(s)

citA, ECK0612, b0619, JW0611, ybeP, cit, mpdB[1][2], mpdB

Product Desc.

sensory histidine kinase in two-component regulatory system with CitB[3]; sensory histidine kinase in two-component regulatory system with DpiA[2]

Two-component system histidine protein kinase; DpiA is cognate sensor; regulates citCDEFXGT operon; represses appY; periplasmic domain functions as a high-affinity citrate receptor; destabilizes plasmid inheritance[4]

Product Synonyms(s)

sensory histidine kinase in two-component regulatory system with citB[1], B0619[3][1], MpdB[3][1], YbeP[3][1], DpiB[3][1], CitA[3][1] , citA, ECK0612, JW0611, mpdB, ybeP, b0619

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): citA[3]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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