tig:Quickview: Difference between revisions

Latest revision as of 21:45, 27 May 2013

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Quickview

Gene

Standard Name	tig
Gene Synonym(s)	ECK0430, b0436, JW0426^[1], JW0426
Product Desc.	trigger factor; a molecular chaperone involved in cell division^[2]^[3] Trigger factor, protein folding chaperone; also peptidyl-prolyl cis-trans isomerase; interacts with nascent polypeptide chains^[4]
Product Synonyms(s)	peptidyl-prolyl cis/trans isomerase (trigger factor)^[1], B0436^[2]^[1], Tig^[2]^[1] , ECK0430, JW0426, b0436
Function from GO	<GO_nr />
Knock-Out Phenotype
Regulation/Expression	transcription unit(s): tig^[2]
Regulation/Activity
Quick Links
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Notes

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dnaK and tig mutants are synthetic lethal at 30 degrees C, however, no lethal effects are observed at 23 degrees C. Overproduction of GroEL/GroES at 30 degrees C supresses synthetic lethality.^[4]

References

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↑ ^1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
↑ ^2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
↑ ^4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[LIB:Riley_2006-1] 1.0 ^1.1 ^1.2 ^1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)

[LIB:EcoCyc10.6-2] 2.0 ^2.1 ^2.2 ^2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoCyc11.1-3] EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7

[LIB:EcoGene-4] 4.0 ^4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[1]

[2]

[3]

[4]

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+-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
 <noinclude>{{TabsTop}}
 {{Tab On|Quickview|tig}}{{Tab|Gene|tig}}{{Tab|Gene Product(s)|tig}}{{Tab|Expression|tig}}{{Tab|Evolution|tig}}{{Tab|On One Page|tig}}{{TabsBottom}}
 {|
 |- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"
+|{{Sub}}[[#References| References]]
 |{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
 |}
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+{|   id="D49b026ad6e543"  class=" tableEdit New_Quickview_Table"
 |-
-!{{table_heading_style}} |Gene Name
+!align=left {{table_heading_style}} |Standard Name
-|
+||
-[[tig:Gene|''tig]]'' (synonyms: ''ECK0430, b0436, JW0426'')<ref name='LIB:Riley_2006'/>
+''tig''
 |-
-!{{table_heading_style}} |Product(s)
+!align=left {{table_heading_style}} |Gene Synonym(s)
-|
+||
-[[tig:Gene_Product(s)|Tig product]]<ref name='LIB:Riley_2006'/>: peptidyl-prolyl cis/trans isomerase (trigger factor)<ref name='LIB:Riley_2006'/>, B0436<ref name='LIB:EcoCyc10.6'/>, Tig<ref name='LIB:EcoCyc10.6'/>
+''ECK0430, b0436, JW0426''<ref name='LIB:Riley_2006'/>, JW0426''
 |-
-!{{table_heading_style}} |Description
+!align=left {{table_heading_style}} |Product Desc.
-|
+||
 trigger factor; a molecular chaperone involved in cell division<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
+Trigger factor, protein folding chaperone; also peptidyl-prolyl cis-trans isomerase; interacts with nascent polypeptide chains<ref name='LIB:EcoGene'/>
+|-
+!align=left {{table_heading_style}} |Product Synonyms(s)
+||
+''peptidyl-prolyl cis/trans isomerase (trigger factor)<ref name='LIB:Riley_2006'/>, B0436<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tig<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0430, JW0426, b0436''
+|-
+!align=left {{table_heading_style}} |Function from GO
+||
+<GO_nr />
 |-
-!{{table_heading_style}} |Knock-Out Phenotype
+!align=left {{table_heading_style}} |Knock-Out Phenotype
-|
+||
 |-
-!{{table_heading_style}} |Regulation/Expression
+!align=left {{table_heading_style}} |Regulation/Expression
-|
+||
-transcription unit(s): [[:Category:txn_units:tig|tig]]<ref name='LIB:EcoCyc10.6'/>
+transcription unit(s): [[:Category:Txn_unit:tig|tig]]<ref name='LIB:EcoCyc10.6'/>
 |-
-!{{table_heading_style}} |Regulation/Activity
+!align=left {{table_heading_style}} |Regulation/Activity
-|
+||
 |-
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+!align=left {{table_heading_style}} |Quick Links
+||
+[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tig&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11003]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000992&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tig&loc=MG1655%3A454357..455655,W3110%3A454357..455655,DH10B%3A393688..394986,REL606%3A425838..427136,BW2952%3A357116..358414]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=357116&end=358414&gene=tig&aa=mqvsvettqglgrrvtitiaadsietavkselvnvakkvridgfrkgkvpmnivaqrygasvrqdvlgdlmsrnfidaiikekinpagaptyvpgeyklgedftysvefevypevelqgleaievekpivevtdadvdgmldtlrkqqatwkekdgaveaedrvtidftgsvdgeefeggkasdfvlamgqgrmipgfedgikghkageeftidvtfpeeyhaenlkgkaakfainlkkveerelpeltaefikrfgvedgsveglraevrknmerelksairnrvksqaieglvkandidvpaalidseidvlrrqaaqrfggnekqalelprelfeeqakrrvvvglllgevirtnelkadeervkglieemasayedpkeviefysknkelmdnmrnvaleeqaveavlakakvtekettfnelmnqqa]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tig+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tig]]&nbsp;&nbsp;
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 <protect><!--Quickview_notes--></protect>
-==Notes==
+===Notes===
+{{BacktoTop}}
+dnaK and tig mutants are synthetic lethal at 30 degrees C, however, no lethal effects are observed at 23 degrees C. Overproduction of GroEL/GroES at 30 degrees C supresses synthetic lethality.<ref name='LIB:EcoGene'/>
 <noinclude>
 ==References==
+{{BacktoTop}}
 <references/>
 </noinclude>

tig:Quickview: Difference between revisions

Latest revision as of 21:45, 27 May 2013

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