secB:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="Q49b024d3044b4"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[secB:Gene|''secB]]'' (synonyms: ''ECK3599, b3609, JW3584'')<ref name='LIB:Riley_2006'/>
''secB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[secB:Gene_Product(s)|SecB product]]<ref name='LIB:Riley_2006'/>: protein export chaperone product, B3609 product
''ECK3599, b3609, JW3584''<ref name='LIB:Riley_2006'/>, JW3584''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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SecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
SecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:Sec Protein Secretion Complex|Sec Protein Secretion Complex]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:Sec Protein Secretion Complex|Sec Protein Secretion Complex]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Protein export chaperone; SecB helps SecA deliver proteins to the SecYE core translocon; general protein chaperone<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''protein export chaperone<ref name='LIB:Riley_2006'/>, B3609<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3599, JW3584, b3609''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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non lethal. SecB null strains are deficient in post translational targeting of some secretion and outer membrane proteins.
non lethal. SecB null strains are deficient in post translational targeting of some secretion and outer membrane proteins.<ref name=PMID:3891730/>
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gpsA|gpsA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:gpsA|gpsA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=secB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10937]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000926&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=secB&loc=MG1655%3A3782151..3781684,W3110%3A3856287..3856754,REL606%3A3724894..3724427,DH10B%3A3879728..3879261,BW2952%3A3670010..3670477]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3670010&end=3670477&gene=secB&aa=mseqnntemtfqiqriytkdisfeapnaphvfqkdwqpevkldldtassqladdvyevvlrvtvtaslgeetaflcevqqggifsiagiegtqmahclgaycpnilfpyarecitsmvsrgtfpqlnlapvnfdalfmnylqqqagegteehqda]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=secB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=secB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Penultimate Ser residue missing from purified protein could be a proteolytic artifact.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

secB

Gene Synonym(s)

ECK3599, b3609, JW3584[1], JW3584

Product Desc.

SecB[2][3];

Component of Sec Protein Secretion Complex[2][3]

Protein export chaperone; SecB helps SecA deliver proteins to the SecYE core translocon; general protein chaperone[4]

Product Synonyms(s)

protein export chaperone[1], B3609[2][1], SecB[2][1] , ECK3599, JW3584, b3609

Function from GO

<GO_nr />

Knock-Out Phenotype

non lethal. SecB null strains are deficient in post translational targeting of some secretion and outer membrane proteins.[5]

Regulation/Expression

transcription unit(s): gpsA[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Penultimate Ser residue missing from purified protein could be a proteolytic artifact.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Kumamoto, CA & Beckwith, J (1985) Evidence for specificity at an early step in protein export in Escherichia coli. J. Bacteriol. 163 267-74 PubMed
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