trxB:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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''Apis mellifera''   
''Apis mellifera''   
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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From Inparanoid:20070104  
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''Oryza gramene''   
''Oryza gramene''   
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
''Schizosaccharomyces pombe''   
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00070 PF00070  Pyridine nucleotide-disulphide oxidoreductase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51905 SUPERFAMILY:51905]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00070 PFAM:PF00070]
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22912:SF51 PTHR22912:SF51]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07992 PF07992  Pyridine nucleotide-disulphide oxidoreductase]
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[[EcoCyc]]
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EcoCyc:EG11032
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11032
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001021
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1025
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0003018
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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{{RefHelp}}
<references/>
<references />
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===Categories===
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Latest revision as of 08:31, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000016322 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000019899 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G41680 (score: 1.000; bootstrap: 100%)
  • AT2G17420 (score: 0.076)
  • AT4G35460 (score: 0.066)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231235 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q70G58 (score: 1.000; bootstrap: 100%)
  • Q8VX47 (score: 0.079)
  • Q69PS6 (score: 0.079)
  • Q6ZFU6 (score: 0.063)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR353W (score: 1.000; bootstrap: 100%)
  • YHR106W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC3F63 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

TRXB

From SHIGELLACYC

E. coli O157

TRXB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00070 Pyridine nucleotide-disulphide oxidoreductase

Superfamily (EcoliWiki Page)

SUPERFAMILY:51905

Panther (EcoliWiki Page)

PTHR22912:SF51

Pfam (EcoliWiki Page)

PF07992 Pyridine nucleotide-disulphide oxidoreductase

EcoCyc

EcoCyc:EG11032

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11032

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001021

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1025

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003018

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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