qorA:Evolution: Difference between revisions

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{{Tab|Quickview|qorA}}{{Tab|Gene|qorA}}{{Tab|Gene Product(s)|qorA}}{{Tab|Expression|qorA}}{{Tab On|Evolution|qorA}}{{Tab|On One Page|qorA}}{{TabsBottom}}
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{|class = 'sortable' {{Prettytable}} id='213856'
{|  id="F46ac14d2c17f7"  class=" tableEdit Evolution_homologs_table" 
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!Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
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''Anopheles gambiae''   
''Anopheles gambiae''   
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From Inparanoid:20070104  
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''Apis mellifera''   
''Apis mellifera''   
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''Arabidopsis thaliana''   
''Arabidopsis thaliana''   
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''Bos taurus''   
''Bos taurus''   
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''Caenorhabditis briggsae''   
''Caenorhabditis briggsae''   
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From Inparanoid:20070104  
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''Caenorhabditis elegans''   
''Caenorhabditis elegans''   
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''Canis familiaris''   
''Canis familiaris''   
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''Ciona intestinalis''   
''Ciona intestinalis''   
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''Danio rerio''   
''Danio rerio''   
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''Dictyostelium discoideum''   
''Dictyostelium discoideum''   
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''Drosophila melanogaster''   
''Drosophila melanogaster''   
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''Gallus gallus''   
''Gallus gallus''   
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''Homo sapiens''   
''Homo sapiens''   
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''Macaca mulatta''   
''Macaca mulatta''   
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''Monodelphis domestica''   
''Monodelphis domestica''   
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''Mus musculus''   
''Mus musculus''   
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''Oryza gramene''   
''Oryza gramene''   
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''Pan troglodytes''   
''Pan troglodytes''   
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''Rattus norvegicus''   
''Rattus norvegicus''   
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''Saccharomyces cerevisiae''   
''Saccharomyces cerevisiae''   
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''Schizosaccharomyces pombe''   
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''Takifugu rubripes''   
''Takifugu rubripes''   
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''Tetraodon nigroviridis''   
''Tetraodon nigroviridis''   
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''Xenopus tropicalis''   
''Xenopus tropicalis''   
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''Shigella flexneri''   
''Shigella flexneri''   
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''E. coli'' O157  
''E. coli'' O157  
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===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00107 PF00107  Zinc-binding dehydrogenase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=50129 SUPERFAMILY:50129]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=51735 SUPERFAMILY:51735]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00107 PFAM:PF00107]
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11695:SF31 PTHR11695:SF31]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08240 PF08240  Alcohol dehydrogenase GroES-like domain]
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[[EcoCyc]]
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EcoCyc:EG11492
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11492
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001448
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1455
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0013262
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
 
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===Notes===
===Notes===
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==References==
==References==
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{{RefHelp}}
<references/>
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===Categories===
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Latest revision as of 08:37, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000280 (score: 1.000; bootstrap: 73%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000029534 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G61510 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000004109 (score: 1.000; bootstrap: 55%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038883 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00009554 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000005896 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000008400 (score: 1.000; bootstrap: 68%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050306-24 (score: 1.000; bootstrap: 92%)
  • ZDB-CDNA-050306-24 (score: 1.000; bootstrap: 90%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0216934 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0033883 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000018510 (score: 1.000; bootstrap: 54%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000263416 (score: 1.000; bootstrap: 74%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000019158 (score: 1.000; bootstrap: 83%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000023817 (score: 1.000; bootstrap: 72%)

From Inparanoid:20070104

Mus musculus

  • MGI:88527 (score: 1.000; bootstrap: 93%)

From Inparanoid:20070104

Oryza gramene

  • Q8SBA7 (score: 1.000; bootstrap: 99%)
  • Q7XC60 (score: 1.000; bootstrap: 99%)
  • Q9AUT6 (score: 0.847)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000001500 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000038188 (score: 1.000; bootstrap: 96%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBR046C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC14426c (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000143800 (score: 1.000; bootstrap: 91%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00004955001 (score: 1.000; bootstrap: 81%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000006542 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Shigella flexneri

QOR

From SHIGELLACYC

E. coli O157

QOR

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00107 Zinc-binding dehydrogenase

Superfamily (EcoliWiki Page)

SUPERFAMILY:50129

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Panther (EcoliWiki Page)

PTHR11695:SF31

Pfam (EcoliWiki Page)

PF08240 Alcohol dehydrogenase GroES-like domain

EcoCyc

EcoCyc:EG11492

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11492

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001448

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1455

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0013262

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

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References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

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