rnc:Quickview: Difference between revisions

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{|   id="M49b022ec2fe0d"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rnc:Gene|''rnc]]'' (synonyms: ''ECK2565, b2567, JW2551, ranA'')<ref name='LIB:Riley_2006'/>
''rnc''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rnc:Gene_Product(s)|Rnc product]]<ref name='LIB:Riley_2006'/>: RNase III product, B2567 product, RanA product
''ECK2565, b2567, JW2551, ranA''<ref name='LIB:Riley_2006'/>, ranA''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RNase III, ds RNA<ref name='LIB:EcoCyc10.6'/> RNase III<ref name='LIB:EcoCyc11.1'/>  
RNase III, ds RNA<ref name='LIB:EcoCyc10.6'/>; RNase III<ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:RNase III|RNase III]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:RNase III|RNase III]]<ref name='LIB:EcoCyc11.1'/>


RNase III; cleaves double-stranded RNA<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''RNase III<ref name='LIB:Riley_2006'/>, B2567<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RanA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Rnc<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2565, JW2551, ranA, b2567''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:rnc-era-recO-pdxJ-acpS|rnc-era-recO-pdxJ-acpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rnc-era|rnc-era]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:rnc-era-recO-pdxJ-acpS|rnc-era-recO-pdxJ-acpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rnc-era|rnc-era]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rnc&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10857]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000848&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rnc&loc=MG1655%3A2702085..2701405,W3110%3A2702719..2702039,DH10B%3A2793850..2793170,REL606%3A2624875..2625555,BW2952%3A2587210..2587890]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2587210&end=2587890&gene=rnc&aa=mnpivinrlqrklgytfnhqellqqalthrsasskhnerleflgdsilsyvianalyhrfprvdegdmsrmratlvrgntlaelarefelgeclrlgpgelksggfrresiladtvealiggvfldsdiqtveklilnwyqtrldeispgdkqkdpktrlqeylqgrhlplptylvvqvrgeahdqeftihcqvsglsepvvgtgssrrkaeqaaaeqalkklele]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rnc+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rnc]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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rnc is a non-essential gene (Takiff, 1989; Yu, 2000) and the failure to obtain a viable insertion (Baba, 2006) may be due to a polar effect on the downstream essential era gene.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rnc

Gene Synonym(s)

ECK2565, b2567, JW2551, ranA[1], ranA

Product Desc.

RNase III, ds RNA[2]; RNase III[3];

Component of RNase III[3]

RNase III; cleaves double-stranded RNA[4]

Product Synonyms(s)

RNase III[1], B2567[2][1], RanA[2][1], Rnc[2][1] , ECK2565, JW2551, ranA, b2567

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rnc-era-recO-pdxJ-acpS[2], rnc-era[2]

Regulation/Activity
Quick Links



        

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Notes

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rnc is a non-essential gene (Takiff, 1989; Yu, 2000) and the failure to obtain a viable insertion (Baba, 2006) may be due to a polar effect on the downstream essential era gene.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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