lrp:Quickview: Difference between revisions

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{|   id="T49aeeb77f3d81"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[lrp:Gene|''lrp]]'' (synonyms: ''ECK0880, b0889, JW0872, ihb, livR, lrs, lss, lstR, mbf, oppI, rblA, g'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''lrp''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[lrp:Gene_Product(s)|Lrp product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional dual regulator, leucine-binding product, B0889 product, LstR product, Mbf product, OppI product, RblA product, Lss product, Lrs product, Ihb product, LivR product, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system. product
''ECK0880, b0889, JW0872, ihb, livR, lrs, lss, lstR, mbf, oppI, rblA, g''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, alsB''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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Lrp transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
Lrp transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Global regulatory protein, Leu responsive; regulator of high-affinity branched-chain amino acid transport system; octameric or hexadecameric functional state<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding transcriptional dual regulator, leucine-binding<ref name='LIB:Riley_2006'/>, B0889<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LstR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Mbf<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OppI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RblA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lss<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lrs<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ihb<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lrp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LivR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system.<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , alsB, ECK0880, ihb, JW0872, livR, lrs, lss, lstR, mbf, oppI, rblA, b0889''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:lrp|lrp]]<ref name='LIB:EcoCyc10.6'/>, OP00251  
transcription unit(s): [[:Category:Txn_unit:lrp|lrp]]<ref name='LIB:EcoCyc10.6'/>, OP00251  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lrp&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10547]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000540&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lrp&loc=MG1655%3A931818..932312,W3110%3A933017..933511,DH10B%3A985746..986240,REL606%3A949653..950147,BW2952%3A834786..835280]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=834786&end=835280&gene=lrp&aa=mvdskkrpgkdldridrnilnelqkdgrisnvelskrvglsptpclervrrlerqgfiqgytallnphyldasllvfveitlnrgapdvfeqfntavqkleeiqechlvsgdfdyllktrvpdmsayrkllgetllrlpgvndtrtyvvmeevkqsnrlviktr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lrp+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lrp]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Feast/famine regulatory protein. Homodimers bind adjacent DNA binding sites to form functional octameric state. Lrp wraps DNA and probably plays a role in chromatin organization.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lrp

Gene Synonym(s)

ECK0880, b0889, JW0872, ihb, livR, lrs, lss, lstR, mbf, oppI, rblA, g[1][2], alsB

Product Desc.

Lrp transcriptional dual regulator[2][3]

Global regulatory protein, Leu responsive; regulator of high-affinity branched-chain amino acid transport system; octameric or hexadecameric functional state[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator, leucine-binding[1], B0889[2][1], LstR[2][1], Mbf[2][1], OppI[2][1], RblA[2][1], Lss[2][1], Lrs[2][1], Ihb[2][1], Lrp[2][1], LivR[2][1], regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system.[2][1] , alsB, ECK0880, ihb, JW0872, livR, lrs, lss, lstR, mbf, oppI, rblA, b0889

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): lrp[2], OP00251

Regulation/Activity
Quick Links



        

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Notes

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Feast/famine regulatory protein. Homodimers bind adjacent DNA binding sites to form functional octameric state. Lrp wraps DNA and probably plays a role in chromatin organization.[4]



References

[back to top]


  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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