lpxH:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="L49aeeb6add4cf"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[lpxH:Gene|''lpxH]]'' (synonyms: ''ECK0517, b0524, JW0513, ybbF'')<ref name='LIB:Riley_2006'/>
''lpxH''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[lpxH:Gene_Product(s)|LpxH product]]<ref name='LIB:Riley_2006'/>: UDP-2,3-diacylglucosamine pyrophosphatase product, B0524 product, YbbF product
''ECK0517, b0524, JW0513, ybbF''<ref name='LIB:Riley_2006'/>, ybbF''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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EG12666-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
EG12666<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Lipid A biosynthesis, UDP-2,3-diacylglucosamine pyrophosphatase<ref name='LIB:EcoGene'/>
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''UDP-2,3-diacylglucosamine pyrophosphatase<ref name='LIB:Riley_2006'/>, B0524<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbbF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0517, JW0513, ybbF, b0524''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
||
lethal (see PMID:12000771)
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:lpxH|lpxH]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:lpxH|lpxH]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
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[[kegg:ko00540.html|LPS biosynthesis]]
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lpxH&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12666]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002352&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lpxH&loc=MG1655%3A553163..552441,W3110%3A553163..552441,DH10B%3A492495..491773,REL606%3A525326..526048,BW2952%3A455201..455923]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=455201&end=455923&gene=lpxH&aa=matlfiadlhlcveepaitagflrflagearkadalyilgdlfeawigdddpnplhrkmaaaikavsdsgvpcyfihgnrdfllgkrfaresgmtllpeekvlelygrrvlimhgdtlctddagyqafrakvhkpwlqtlflalplfvrkriaarmranskeansskslaimdvnqnavvsamekhqvqwlihghthrpavhelianqqpafrvvlgawhtegsmvkvtaddvelihfpf]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lpxH+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lpxH]]&nbsp;&nbsp;


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===Notes===
===Notes===
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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lpxH

Gene Synonym(s)

ECK0517, b0524, JW0513, ybbF[1], ybbF

Product Desc.

EG12666[2][3]

Lipid A biosynthesis, UDP-2,3-diacylglucosamine pyrophosphatase[4]

Product Synonyms(s)

UDP-2,3-diacylglucosamine pyrophosphatase[1], B0524[2][1], YbbF[2][1], LpxH[2][1] , ECK0517, JW0513, ybbF, b0524

Function from GO

<GO_nr />

Knock-Out Phenotype

lethal (see PMID:12000771[5])

Regulation/Expression

transcription unit(s): lpxH[2]

Regulation/Activity

LPS biosynthesis

Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Babinski, KJ et al. (2002) Accumulation of the lipid A precursor UDP-2,3-diacylglucosamine in an Escherichia coli mutant lacking the lpxH gene. J. Biol. Chem. 277 25947-56 PubMed
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