tilS:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>WikiEntryBot
Automated import of articles
touch
 
(14 intermediate revisions by 2 users not shown)
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.2137.U46a99bb831883-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2137.B49b026afd8fe6-->
<!--
<!--
******************************************************************************************
******************************************************************************************
*
*  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|{{Prettytable}}
{|   id="B49b026afd8fe6"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[tilS:Gene|''tilS]]'' (synonyms: ''ECK0187, b0188, JW0183, mesJ, yaeN'')<ref name='LIB:Riley_2006'/>
''tilS''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[tilS:Gene_Product(s)|TilS product]]<ref name='LIB:Riley_2006'/>: tRNA(Ile)-lysidine synthetase product, B0188 product, YaeN product, MesJ product
''ECK0187, b0188, JW0183, mesJ, yaeN''<ref name='LIB:Riley_2006'/>, yaeN''
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
G6096-MONOMER<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
G6096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


tRNA(Ile) lysidine (L34) synthase, ATP-dependent; solely responsible for tRNA(Ile) lysidine 34 (L34) formation<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''tRNA(Ile)-lysidine synthetase<ref name='LIB:Riley_2006'/>, B0188<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MesJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TilS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0187, JW0183, mesJ, yaeN, b0188''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s): [[:Category:Txn_unit:tilS|tilS]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:tilS|tilS]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.2137.U46a99bb831883&page=2137&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=tilS&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6096]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002716&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=tilS&loc=MG1655%3A212331..213629,W3110%3A212331..213629,DH10B%3A186435..187733,REL606%3A215173..216471,BW2952%3A212330..213628]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=212330&end=213628&gene=tilS&aa=mtltlnrqlltsrqilvafsggldstvllhqlvqwrtenpgvalraihvhhglsanadawvthcenvcqqwqvplvvervqlaqeglgieaqarqaryqafartllpgevlvtaqhlddqcetfllalkrgsgpaglsamaevsefagtrlirpllartrgelvqwarqydlrwiedesnqddsydrnflrlrvvpllqqrwphfaeatarsaalcaeqeslldelladdlahcqspqgtlqivpmlamsdarraaiirrwlagqnapmpsrdalvriwqevalaredaspclrlgafeirryqsqlwwiksvtgqsenivpwqtwlqplelpaglgsvqlnaggdirppradeavsvrfkapgllhivgrnggrklkkiwqelgvppwlrdttpllfygetliaaagvfvtqegvaegengvsfvwqktls]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tilS+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=tilS]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.2137.B49b026afd8fe6&page=2137&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.2137.U46a99bb831883-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.2137.B49b026afd8fe6--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
YaeN (TilS) is mistakenly labeled as a cell cycle gene in many databases. the confusion arose from the misinterpretation of Genbank Z50870. the real "minE suppressor" is the small rof gene next to tilS, labeled as orf4 in Z50870.  PDB: 1NI5. Gu M., Burling T., Lima C.D., Structure of the MesJ PP-ATPase from Escherichia coli, unpublished.  tilS is an essential gene.  AFMB Structural Genomics target No. 121 (http://afmb.cnrs-mrs.fr/article171.html).<ref name='LIB:EcoGene'/>




Line 63: Line 81:
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:45, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

tilS

Gene Synonym(s)

ECK0187, b0188, JW0183, mesJ, yaeN[1], yaeN

Product Desc.

G6096[2][3]

tRNA(Ile) lysidine (L34) synthase, ATP-dependent; solely responsible for tRNA(Ile) lysidine 34 (L34) formation[4]

Product Synonyms(s)

tRNA(Ile)-lysidine synthetase[1], B0188[2][1], YaeN[2][1], MesJ[2][1], TilS[2][1] , ECK0187, JW0183, mesJ, yaeN, b0188

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): tilS[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YaeN (TilS) is mistakenly labeled as a cell cycle gene in many databases. the confusion arose from the misinterpretation of Genbank Z50870. the real "minE suppressor" is the small rof gene next to tilS, labeled as orf4 in Z50870. PDB: 1NI5. Gu M., Burling T., Lima C.D., Structure of the MesJ PP-ATPase from Escherichia coli, unpublished. tilS is an essential gene. AFMB Structural Genomics target No. 121 (http://afmb.cnrs-mrs.fr/article171.html).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=tilS:Quickview&oldid=1395841"