secB:Quickview: Difference between revisions

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{|{{Prettytable}}
{|   id="Q49b024d3044b4"  class=" tableEdit New_Quickview_Table" 
 
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[secB:Gene|''secB]]'' (synonyms: ''ECK3599, b3609, JW3584'')<ref name='LIB:Riley_2006'/>
''secB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[secB:Gene_Product(s)|SecB product]]<ref name='LIB:Riley_2006'/>: protein export chaperone product, B3609 product
''ECK3599, b3609, JW3584''<ref name='LIB:Riley_2006'/>, JW3584''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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SecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
SecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:Sec Protein Secretion Complex|Sec Protein Secretion Complex]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:Sec Protein Secretion Complex|Sec Protein Secretion Complex]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Protein export chaperone; SecB helps SecA deliver proteins to the SecYE core translocon; general protein chaperone<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''protein export chaperone<ref name='LIB:Riley_2006'/>, B3609<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SecB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3599, JW3584, b3609''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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non lethal. SecB null strains are deficient in post translational targeting of some secretion and outer membrane proteins.<ref name=PMID:3891730/>
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gpsA|gpsA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:gpsA|gpsA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=secB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10937]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000926&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=secB&loc=MG1655%3A3782151..3781684,W3110%3A3856287..3856754,REL606%3A3724894..3724427,DH10B%3A3879728..3879261,BW2952%3A3670010..3670477]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3670010&end=3670477&gene=secB&aa=mseqnntemtfqiqriytkdisfeapnaphvfqkdwqpevkldldtassqladdvyevvlrvtvtaslgeetaflcevqqggifsiagiegtqmahclgaycpnilfpyarecitsmvsrgtfpqlnlapvnfdalfmnylqqqagegteehqda]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=secB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=secB]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Penultimate Ser residue missing from purified protein could be a proteolytic artifact.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

secB

Gene Synonym(s)

ECK3599, b3609, JW3584[1], JW3584

Product Desc.

SecB[2][3];

Component of Sec Protein Secretion Complex[2][3]

Protein export chaperone; SecB helps SecA deliver proteins to the SecYE core translocon; general protein chaperone[4]

Product Synonyms(s)

protein export chaperone[1], B3609[2][1], SecB[2][1] , ECK3599, JW3584, b3609

Function from GO

<GO_nr />

Knock-Out Phenotype

non lethal. SecB null strains are deficient in post translational targeting of some secretion and outer membrane proteins.[5]

Regulation/Expression

transcription unit(s): gpsA[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Penultimate Ser residue missing from purified protein could be a proteolytic artifact.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Kumamoto, CA & Beckwith, J (1985) Evidence for specificity at an early step in protein export in Escherichia coli. J. Bacteriol. 163 267-74 PubMed
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