ffh:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ffh:Gene|''ffh]]'' (synonyms: ''ECK2607, b2610, JW5414, P48'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ffh''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ffh:Gene_Product(s)|Ffh product]]<ref name='LIB:Riley_2006'/>: Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) product, B2610 product, P48 product
''ECK2607, b2610, JW5414, P48''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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protein component of the signal recognition particle (SRP)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
protein component of the signal recognition particle (SRP)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:Signal Recognition Particle Protein Translocation System|Signal Recognition Particle Protein Translocation System]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:Signal Recognition Particle Protein Translocation System|Signal Recognition Particle Protein Translocation System]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Signal Recognition Particle (SRP) protein, with 4.5S RNA; GTPase involved in co-translational protein translocation into and through membranes<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)<ref name='LIB:Riley_2006'/>, B2610<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ffh<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, P48<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2607, JW5414, b2610''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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essential<ref name='PMID:7559342'/>
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ffh|ffh]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ffh|ffh]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ffh&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10300]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000294&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ffh&loc=MG1655%3A2745817..2744456,W3110%3A2746451..2745090,REL606%3A2669090..2667729,DH10B%3A2837582..2836221,BW2952%3A2630268..2631629]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2630268&end=2631629&gene=ffh&aa=mfdnltdrlsrtlrnisgrgrltednvkdtlrevrmalleadvalpvvrefinrvkekavghevnksltpgqefvkivrnelvaamgeenqtlnlaaqppavvlmaglqgagkttsvgklgkflrekhkkkvlvvsadvyrpaaikqletlaeqvgvdffpsdvgqkpvdivnaalkeaklkfydvllvdtagrlhvdeammdeikqvhasinpvetlfvvdamtgqdaantakafnealpltgvvltkvdgdarggaalsirhitgkpikflgvgektealepfhpdriasrilgmgdvlsliedieskvdraqaeklasklkkgdgfdlndfleqlrqmknmggmaslmgklpgmgqipdnvksqmddkvlvrmeaiinsmtmkerakpeiikgsrkrriaagcgmqvqdvnrllkqfddmqrmmkkmkkggmakmmrsmkgmmppgfpgr]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ffh+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ffh]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Binds nascent signal peptides, GTP and 4.5S RNA. GTPase stimulated by FtsY. Binds TrxA (Kumar, 2004).<ref name='LIB:EcoGene'/>




Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ffh

Gene Synonym(s)

ECK2607, b2610, JW5414, P48[1][2]

Product Desc.

protein component of the signal recognition particle (SRP)[2][3];

Component of Signal Recognition Particle Protein Translocation System[2][3]

Signal Recognition Particle (SRP) protein, with 4.5S RNA; GTPase involved in co-translational protein translocation into and through membranes[4]

Product Synonyms(s)

Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)[1], B2610[2][1], Ffh[2][1], P48[2][1] , ECK2607, JW5414, b2610

Function from GO

<GO_nr />

Knock-Out Phenotype

essential[5]

Regulation/Expression

transcription unit(s): ffh[2]

Regulation/Activity
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Notes

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Binds nascent signal peptides, GTP and 4.5S RNA. GTPase stimulated by FtsY. Binds TrxA (Kumar, 2004).[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Persson, BC et al. (1995) Functional analysis of the ffh-trmD region of the Escherichia coli chromosome by using reverse genetics. J. Bacteriol. 177 5554-60 PubMed
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