gapC:Quickview: Difference between revisions

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{{Tab On|Quickview|gapC_1}}{{Tab|Gene|gapC_1}}{{Tab|Gene Product(s)|gapC_1}}{{Tab|Expression|gapC_1}}{{Tab|Evolution|gapC_1}}{{Tab|On One Page|gapC_1}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[gapC_1:Gene|''gapC_1]]'' (synonyms: ''gapC, ECK1409, b1416, JW1413, b1417, JW5906, b4493, JW5906+JW1413, gapC_2'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
''gapC''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[gapC_1:Gene_Product(s)|GapC product]]<ref name='LIB:EcoCyc10.6'/>: GapC_2 product, B1416 product, GapC_1 product, B1417 product
''Note that this is a pseudogene in K12 strains., ECK1409, JW1413, JW5906, b4493''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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glyceraldehyde 3-phosphate dehydrogenase C, interrupted<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> split glyceraldehyde 3-phosphate dehydrogenase C<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
Note that this is a pseudogene in K12 strains.
 
glyceraldehyde 3-phosphate dehydrogenase C, interrupted<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; split glyceraldehyde 3-phosphate dehydrogenase C<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Product Synonyms(s)
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''GapC<ref name='LIB:EcoCyc10.6'/>, GapC_2<ref name='LIB:EcoCyc10.6'/>, B1416<ref name='LIB:EcoCyc10.6'/>, GapC_1<ref name='LIB:EcoCyc10.6'/>, B1417<ref name='LIB:EcoCyc10.6'/>,, ECK1409, JW1413, JW5906, b4493''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gapC_1C_2|gapC_1C_2]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:gapCC_2|gapCC_2]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=1&s=search]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004456&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=1&loc=MG1655%3A1487988..1487737,W3110%3A1491678..1491427,MG1655%3A1488737..1487985,W3110%3A1492427..1491675,MG1655%3A1488737..1487737,W3110%3A1492427..1491427]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1492427&end=1491427&gene=1&aa=mskvgingfgrigrlvlrrllevksnidvvaindltspkilayllkhdsnygpfpwsvdftedslivdgksiavyaekeaknipwkakgaeiivectgfytsaeksqahldagakkvlisapagemktivynvnddtldgndtivsvascttnclapmakalhdsfgievgtmttihaytgtqslvdgprgkdlrasraaaeniiphttgaakaiglvipelsgklkghaqrvpvktgsvtelvsilgkkvtaeevnnalkqattnnesfgytdeeivssdiigshfgsvfdatqteitavgdlqlvktvawydneygfvtqlirtlekfakl]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=1+AND+gapC]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=1]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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This is a pseudogene in K12 strains.




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==References==
==References==
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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

gapC

Gene Synonym(s)

Note that this is a pseudogene in K12 strains., ECK1409, JW1413, JW5906, b4493

Product Desc.

Note that this is a pseudogene in K12 strains.

glyceraldehyde 3-phosphate dehydrogenase C, interrupted[1][2]; split glyceraldehyde 3-phosphate dehydrogenase C[1][2]

Product Synonyms(s)

GapC[1], GapC_2[1], B1416[1], GapC_1[1], B1417[1],, ECK1409, JW1413, JW5906, b4493

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gapCC_2[1]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


This is a pseudogene in K12 strains.



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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