Template:Gene: Difference between revisions

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{{Tab|Quickview|{{{1}}}}}{{Tab On|Gene|{{{1}}}}}{{Tab|Gene Product(s)|{{{1}}}}}{{Tab|Expression|{{{1}}}}}{{Tab|Evolution|{{{1}}}}}{{Tab|On One Page|{{{1}}}}}{{TabsBottom}}
{{Tab|Quickview|{{{1}}}}}{{Tab On|Gene|{{{1}}}}}{{Tab|Gene Product(s)|{{{1}}}}}{{Tab|Expression|{{{1}}}}}{{Tab|Evolution|{{{1}}}}}{{Tab|On One Page|{{{1}}}}}{{TabsBottom}}
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|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;"  
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) |Location(s)]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#DNA Sequence and Features|DNA Sequence and Features]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions |Genetic Interactions]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions in Other Databases]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Links |Links]]
|{{Sub}}[[#References |References]]
|{{Sub}}[[#References |References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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==Nomenclature==
==Nomenclature==
{|{{Prettytable}}
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<protect><newTableEdit>Template:Gene_nomenclature_table</newTableEdit></protect>
===Notes===


|-
|bgcolor ='#DDDDFF'|'''Standard name''' || <!--gn--><!--/gn-->
|-
|bgcolor ='#DDDDFF'|'''Mnemonic''' || <!--pd--><!--/pd-->
|-
|bgcolor ='#DDDDFF'|'''Synonyms''' || <!--syn--><!--/syn-->
|-
|bgcolor ='#DDDDFF'|'''Accessions'''||
*bnum: <!--bnum--><!--/bnum-->
*JW: <!--jwnum--><!--/jwnum-->
*ECK: <!--eck--><!--/eck-->
*EcoCyc: <!--ecocyc--><!--/ecocyc-->
|-
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
Please do not edit this section.  Users should add or edit information below "Notes"
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===Notes===


==Location(s)==
==Location(s) and DNA Sequence==
{|{{Prettytable}}
{{BacktoTop}}
|-
<protect><newTableEdit>Template:Gene_location_table</newTableEdit></protect>
|bgcolor ='#DDDDFF'| '''Map location''' ||<!--maploc--><!--/maploc-->
|-
|bgcolor ='#DDDDFF'| '''Genome coordinates'''
|
*In MG1655: <!--mgleft--><!--/mgleft--> to <!--mgright--><!--/mgright-->
{{GBrowseFigureByCoord|<!--mgleftext--><!--/mgleftext-->|<!--mgrightext--><!--/mgrightext-->}}
*In W3110:<!--wleft--><!--/wleft--> to <!--wright--><!--/wright-->
{{GBrowseFigureByCoord|<!--wleftext--><!--/wleftext-->|<!--wrightext--><!--/wrightext-->|ecoli_W3110|W3110}}
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|bgcolor ='#DDDDFF'| '''Genome browsers'''
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*[http://biocyc.org/ECOLI/NEW-IMAGE?type=LOCUS-POSITION&object=<!--eg--><!--/eg-->&chromosome=COLI-K12 EcoCyc] (MG1655)
*[http://www.ecogene.org/geneinfo.php?eg_id=<!--eg--><!--/eg--> EcoGene](MG1655)
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli/?q=MG1655:<!--mgleft--><!--/mgleft-->..<!--mgright--><!--/mgright--> Gbrowse](MG1655)
*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli_W3110/?q=W3110:<!--wleft--><!--/wleft-->..<!--wright--><!--/wright--> Gbrowse] (W3110)
|-
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
Please do not edit this section.  Users should add or edit information below "Notes"
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===Notes===
===Notes===


==DNA sequence and features==
{|{{Prettytable}}
|-
|bgcolor ='#DDDDFF'| '''DNA sequence in MG1655:'''
|[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli/?plugin=FastaDumper&name=MG1655:<!--mgleft--><!--/mgleft-->..<!--mgright--><!--/mgright-->&plugin_action=Go FastA dump]
|-
|bgcolor ='#DDDDFF'| '''DNA sequence in W3110:'''
|[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/ecoli_W3110/?plugin=FastaDumper&name=W3110:<!--wleft--><!--/wleft-->..<!--wright--><!--/wright-->&plugin_action=Go FastA dump]
|-
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
Please do not edit this section.  Users should add or edit information below "Notes"
</small>


|}
==Sequence Features==
{{BacktoTop}}
<protect><newTableEdit>Template:Gene_sequence_features_table</newTableEdit></protect>
====Notes====


<!--dnafeatures--><!--/dnafeatures-->


==Alleles and Phenotypes==
{{BacktoTop}}
<protect><newTableEdit>Template:Gene_allele_table</newTableEdit></protect>
===Notes===
===Notes===


==Alleles and Phenotypes==
 
{|{{{Prettytable}}
==Genetic Interactions==
|-
{{BacktoTop}}
|bgcolor='#DDDDFF' |'''Allele'''
<protect><newTableEdit>Template:Genetic_interaction_table</newTableEdit></protect>
|bgcolor='#DDDDFF' |'''nt Change'''
|bgcolor='#DDDDFF' |'''aa Change'''
|bgcolor='#DDDDFF' |'''Phenotype'''
|bgcolor='#DDDDFF' |'''Reference'''
|bgcolor='#DDDDFF' |'''CGSC ID'''
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|colspan = '6'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
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===Notes===
===Notes===
==Genetic Resources==


{|{{Prettytable}}


|-
==Genetic Resources==
|bgcolor ='#DDDDFF'|'''Linked Markers'''
{{BacktoTop}}
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<protect><newTableEdit>Template:Gene_resource_table</newTableEdit></protect>
|-
===Notes===
|bgcolor ='#DDDDFF'| '''Strains carrying mutation in gene'''
|
*[http://shigen.lab.nig.ac.jp/ecoli/strain/keioCollectionQueryAction.do;jsessionid=D340DC9D26B2DD7A214784AAF526B1E9.tomcat4_4 National BioResource Project E. coli strains] Keio collection, transposon insertions
*Singer et al. transposon insertion alleles at CGSC add links to Stock Center and to papers by Singer et al. and Nicholson et al.
|-
|bgcolor ='#DDDDFF'| '''Clones'''
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*[http://ecoli.naist.jp/GB6/kohara_info.jsp?fword=101 Kohara phage]
*[http://ecoli.naist.jp/GB6/ex_archive.jsp?id=<!--jwnum--><!--/jwnum--> ASKA Clone]
|-
|bgcolor ='#DDDDFF'| '''F's and Hfrs'''
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|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
Please do not edit this section.  Users should add or edit information below "Notes"
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<noinclude>


==Accessions in Other Databases==
==Accessions in Other Databases==
{|{{Prettytable}}
{{BacktoTop}}
|-
<protect><newTableEdit>Template:Gene_accessions_table</newTableEdit></protect>
|bgcolor ='#DDDDFF'|'''EcoCyc''' ||[http://biocyc.org/ECOLI/NEW-IMAGE?type=GENE&object=<!--eg--><!--/eg--> <!--eg--><!--/eg-->]
===Notes===
|-
 
|colspan = '2'|<small>The contents of this table are [[Help:AutoContent|automatically generated]].
Please do not edit this section.  Users should add or edit information below "Notes"
</small>


|}
==Links==
{{BacktoTop}}
<protect><newTableEdit>Template:Links_table</newTableEdit></protect>


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==References==
==References==
{{BacktoTop}}
{{RefHelp}}
<references/>
<references/>


__NOTOC__
===Categories===
<noinclude><!--categories--><!--/categories--></noinclude>

Latest revision as of 20:44, 9 August 2012

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

[[{{{1}}}:Quickview|Quickview]]   Gene   [[{{{1}}}:Gene Product(s)|Gene Product(s)]]   [[{{{1}}}:Expression|Expression]]   [[{{{1}}}:Evolution|Evolution]]   [[{{{1}}}:On One Page|On One Page]]    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

[back to top]


<newTableEdit>Template:Gene_nomenclature_table</newTableEdit>

Notes

Location(s) and DNA Sequence

[back to top]


<newTableEdit>Template:Gene_location_table</newTableEdit>

Notes

Sequence Features

[back to top]


<newTableEdit>Template:Gene_sequence_features_table</newTableEdit>

Notes

Alleles and Phenotypes

[back to top]


<newTableEdit>Template:Gene_allele_table</newTableEdit>

Notes

Genetic Interactions

[back to top]


<newTableEdit>Template:Genetic_interaction_table</newTableEdit>

Notes

Genetic Resources

[back to top]


<newTableEdit>Template:Gene_resource_table</newTableEdit>

Notes

Accessions in Other Databases

[back to top]


<newTableEdit>Template:Gene_accessions_table</newTableEdit>

Notes

Links

[back to top]


<newTableEdit>Template:Links_table</newTableEdit>


<protect>

References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

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