kdsC:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
imported>WikiEntryBot
Automated import of articles
touch
 
(16 intermediate revisions by 3 users not shown)
Line 17: Line 17:
|}
|}
</noinclude>
</noinclude>
<!--box uid=421aa90e079fa326b6494f812ad13e79.8136.Y46a9a14334c14-->
<protect><!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.8136.Z49aeeaaf3253c-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
{|{{Prettytable}}
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|   id="Z49aeeaaf3253c"  class=" tableEdit New_Quickview_Table" 
 
|-
|-
!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
|
||
[[kdsC:Gene|''kdsC]]'' (synonyms: ''ECK3187, b3198, JW3165, yrbI, yrbJ'')<ref name='LIB:Riley_2006'/>
''kdsC''
|-
|-
!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
|
||
[[kdsC:Gene_Product(s)|KdsC product]]<ref name='LIB:Riley_2006'/>: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase product, B3198 product, YrbJ product, YrbI product
''ECK3187, b3198, JW3165, yrbI, yrbJ''<ref name='LIB:Riley_2006'/>, yrbJ''
|-
|-
!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
|
||
3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase|3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase]]<ref name='LIB:EcoCyc10.6'/>
Component of [[:Category:Complex:3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase|3-deoxy-D-<i>manno</i>-octulosonate 8-phosphate phosphatase]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase; LPS biosynthesis; HAD22<ref name='LIB:EcoGene'/>
|-
!align=left {{table_heading_style}} |Product Synonyms(s)
||
''3-deoxy-D-manno-octulosonate 8-phosphate phosphatase<ref name='LIB:Riley_2006'/>, B3198<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrbJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdsC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YrbI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3187, JW3165, yrbI, yrbJ, b3198''
|-
!align=left {{table_heading_style}} |Function from GO
||
<GO_nr />
|-
|-
!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
|
||


|-
|-
!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
|
||
transcription unit(s):   
transcription unit(s):   
|-
|-
!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
|
||


|-
|-
|colspan='2'|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.8136.Y46a9a14334c14&page=8136&pagename={{FULLPAGENAMEE}} edit table]
!align=left {{table_heading_style}} |Quick Links
||
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=kdsC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7663]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004211&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=kdsC&loc=MG1655%3A3340295..3340861,W3110%3A3342128..3342694,DH10B%3A3438040..3438606,REL606%3A3277508..3278074,BW2952%3A3227443..3228009]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3227443&end=3228009&gene=kdsC&aa=mskagaslatcygpvsadviakaenirllildvdgvlsdgliymgnngeelkafnvrdgygircaltsdievaiitgrkaklvedrcatlgithlyqgqsnkliafsdlleklaiapenvayvgddlidwpvmekvglsvavadahpllipradyvtriaggrgavrevcdllllaqgkldeakgqsi]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=kdsC+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=kdsC]]&nbsp;&nbsp;
 
|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=bc145ea147f7e36caf09c1bfeed4ee9d.8136.Z49aeeaaf3253c&page=8136&pagename={{FULLPAGENAMEE}}&type=1&template=New_Quickview_Table edit table]</span> ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.8136.Y46a9a14334c14-->
<!--box uid=bc145ea147f7e36caf09c1bfeed4ee9d.8136.Z49aeeaaf3253c--></protect>
{{Quickview_table_help}}
{{Quickview_table_help}}
<protect><!--Quickview_notes--></protect>
<protect><!--Quickview_notes--></protect>
===Notes===
===Notes===
{{BacktoTop}}
{{BacktoTop}}
YrbI is renamed as KdsC (personal comm., R.W. Woodard, Univ. of Mich.). KdsC native N-terminal sequence is from E. coli B. Cloned kdsC is from BL21. KdsC is tetrameric and requires a divalent metal cofactor. HAD superfamily.<ref name='LIB:EcoGene'/>




Line 60: Line 83:
==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
</noinclude>
</noinclude>

Latest revision as of 21:48, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

kdsC

Gene Synonym(s)

ECK3187, b3198, JW3165, yrbI, yrbJ[1], yrbJ

Product Desc.

3-deoxy-D-manno-octulosonate 8-phosphate phosphatase[2][3];

Component of [[:Category:Complex:3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|3-deoxy-D-manno-octulosonate 8-phosphate phosphatase]][2][3]

3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KDO 8-P phosphatase; LPS biosynthesis; HAD22[4]

Product Synonyms(s)

3-deoxy-D-manno-octulosonate 8-phosphate phosphatase[1], B3198[2][1], YrbJ[2][1], KdsC[2][1], YrbI[2][1] , ECK3187, JW3165, yrbI, yrbJ, b3198

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s):

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YrbI is renamed as KdsC (personal comm., R.W. Woodard, Univ. of Mich.). KdsC native N-terminal sequence is from E. coli B. Cloned kdsC is from BL21. KdsC is tetrameric and requires a divalent metal cofactor. HAD superfamily.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=kdsC:Quickview&oldid=1396677"