chpR:Quickview: Difference between revisions

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{{Tab On|Quickview|mazE}}{{Tab|Gene|mazE}}{{Tab|Gene Product(s)|mazE}}{{Tab|Expression|mazE}}{{Tab|Evolution|mazE}}{{Tab|On One Page|mazE}}{{TabsBottom}}
{{Tab On|Quickview|chpR}}{{Tab|Gene|chpR}}{{Tab|Gene Product(s)|chpR}}{{Tab|Expression|chpR}}{{Tab|Evolution|chpR}}{{Tab|On One Page|chpR}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[mazE:Gene|''mazE]]'' (synonyms: ''chpR, ECK2777, b2783, JW2754, chpAI'')<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''chpR''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[mazE:Gene_Product(s)|ChpR product]]<ref name='LIB:Riley_2006'/>: antitoxin of the ChpA-ChpR toxin-antitoxin system product, B2783 product, MazE product, ChpAI product
''chpR, ECK2777, b2783, JW2754, chpAI'', mazE<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, chpAI, tasA''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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antitoxin of the MazEF &quot;addiction module&quot;<ref name='LIB:EcoCyc10.6'/> MazE antitoxin of the MazF-MazE toxin-antitoxin system<ref name='LIB:EcoCyc11.1'/>  
antitoxin of the MazEF &quot;addiction module&quot;<ref name='LIB:EcoCyc10.6'/>; MazE antitoxin of the MazF-MazE toxin-antitoxin system<ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:MazE antitoxin of the MazF-MazE toxin-antitoxin system|MazE antitoxin of the MazF-MazE toxin-antitoxin system]]<ref name='LIB:EcoCyc11.1'/>,[[:Category:Complex:MazE-MazF complex|MazE-MazF complex]]<ref name='LIB:EcoCyc11.1'/>
Component of [[:Category:Complex:MazE antitoxin of the MazF-MazE toxin-antitoxin system|MazE antitoxin of the MazF-MazE toxin-antitoxin system]]<ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:MazE-MazF complex|MazE-MazF complex]]<ref name='LIB:EcoCyc11.1'/>


MazE antitoxin, toxin is MazF<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''antitoxin of the ChpA-ChpR toxin-antitoxin system<ref name='LIB:Riley_2006'/>, B2783<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MazE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChpR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ChpAI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , chpAI, chpR, ECK2777, JW2754, tasA, b2783''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:mazEF|mazEF]]<ref name='LIB:EcoCyc10.6'/>, chpRA, [[:Category:Txn_unit:relA-mazEF|relA-mazEF]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>, relA-chpRA, chpA
 
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=chpR&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=chpR&loc=BW2952%3A2794590..2794925,MG1655%3A2909361..2909113,W3110%3A2909995..2909747,DH10B%3A3001903..3001655]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3001903&end=3001655&gene=chpR&aa=mihssvkrwgnspavripatlmqalnlniddevkidlvdgkliiepvrkepvftlaelvnditpenlhenidwgepkdkevw]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=chpR+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=chpR]]&nbsp;&nbsp;
 
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==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
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Latest revision as of 21:58, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

chpR

Gene Synonym(s)

chpR, ECK2777, b2783, JW2754, chpAI, mazE[1][2], chpAI, tasA

Product Desc.

antitoxin of the MazEF "addiction module"[2]; MazE antitoxin of the MazF-MazE toxin-antitoxin system[3];

Component of MazE antitoxin of the MazF-MazE toxin-antitoxin system[3]; MazE-MazF complex[3]

MazE antitoxin, toxin is MazF[4]

Product Synonyms(s)

antitoxin of the ChpA-ChpR toxin-antitoxin system[1], B2783[2][1], MazE[2][1], ChpR[2][1], ChpAI[2][1] , chpAI, chpR, ECK2777, JW2754, tasA, b2783

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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