lrhA:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[lrhA:Gene|''lrhA]]'' (synonyms: ''ECK2283, b2289, JW2284, genR'')<ref name='LIB:Riley_2006'/>
''lrhA''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[lrhA:Gene_Product(s)|LrhA product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes product, B2289 product, GenR product
''ECK2283, b2289, JW2284, genR''<ref name='LIB:Riley_2006'/>, genR''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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LrhA transcriptional repressor<ref name='LIB:EcoCyc10.6'/> LrhA transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/>  
LrhA transcriptional repressor<ref name='LIB:EcoCyc10.6'/>; LrhA transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/>


Transcriptional repressor of flagellar and motility master regulator FlhDC; autoregulator; mutation confers lower RpoS levels, modulates rssB activity<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes<ref name='LIB:Riley_2006'/>, B2289<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GenR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LrhA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2283, genR, JW2284, b2289''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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|-
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:lrhA|lrhA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:lrhA|lrhA]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lrhA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12123]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002026&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lrhA&loc=MG1655%3A2404663..2403725,W3110%3A2411311..2410373,REL606%3A2350232..2349294,DH10B%3A2496428..2495490,BW2952%3A2289530..2290468]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2289530&end=2290468&gene=lrhA&aa=misanrpiinldldllrtfvavadlntfaaaaaavcrtqsavsqqmqrleqlvgkelfarhgrnklltehgiqllgyarkilrfndeacsslmfsnlqgvltigasdesadtilpfllnrvssvypklaldvrvkrnaymaemlesqevdlmvtthrpsafkalnlrtspthwycaaeyilqkgepiplvllddpspfrdmvlatlnkadipwrlayvastlpavraavkaglgvtarpvemmspdlrvlsgvdglpplpdteyllcydpssnnelaqviyqamesyhnpwqyspmsapegddsllierdie]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lrhA+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lrhA]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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LysR family.  LhrA is upstream of the nuo operon, but is not part of the nuo operon and does not regulate the nuo operon.<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lrhA

Gene Synonym(s)

ECK2283, b2289, JW2284, genR[1], genR

Product Desc.

LrhA transcriptional repressor[2]; LrhA transcriptional dual regulator[3]

Transcriptional repressor of flagellar and motility master regulator FlhDC; autoregulator; mutation confers lower RpoS levels, modulates rssB activity[4]

Product Synonyms(s)

DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes[1], B2289[2][1], GenR[2][1], LrhA[2][1] , ECK2283, genR, JW2284, b2289

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): lrhA[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


LysR family. LhrA is upstream of the nuo operon, but is not part of the nuo operon and does not regulate the nuo operon.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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