abgT:Quickview: Difference between revisions

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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[abgT:Gene|''abgT]]'' (synonyms: ''ECK1332, b1336, JW5822, ydaH'')<ref name='LIB:Riley_2006'/>
''abgT''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[abgT:Gene_Product(s)|AbgT product]]<ref name='LIB:Riley_2006'/>: predicted cryptic aminobenzoyl-glutamate transporter product, B1336 product, YdaH product
''ECK1332, b1336, JW5822, ydaH''<ref name='LIB:Riley_2006'/>, ydaH''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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AbgT Transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>  
AbgT Transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


p-Aminobenzoyl-glutamate transporter; membrane protein<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''predicted cryptic aminobenzoyl-glutamate transporter<ref name='LIB:Riley_2006'/>, B1336<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdaH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AbgT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1332, JW5822, ydaH, b1336''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ogt|ogt]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ogt|ogt]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=abgT&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12853]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002401&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=abgT&loc=MG1655%3A1399797..1398271,W3110%3A1403487..1401961,DH10B%3A1489193..1487667,REL606%3A1398943..1397417,BW2952%3A1290330..1291856]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1290330&end=1291856&gene=abgT&aa=mpmsmssipsssqsgklygwverignkvphpfllfiyliivlmvttailsafgvsaknptdgtpvvvknllsveglhwflpnviknfsgfaplgailalvlgaglaervgllpalmvkmashvnaryasymvlfiaffshissdaalvimppmgaliflavgrhpvagllaaiagvgcgftanllivttdvllsgisteaaaafnpqmhvsvidnwyfmassvvvltivgglitdkiieprlgqwqgnsdeklqtltesqrfglriagvvsllfiaaialmvipqngilrdpinhtvmpspfikgivpliilfffvvslaygiatrtirrqadlphlmiepmkemagfivmvfplaqfvamfnwsnmgkfiavgltdilessglsgipafvglallssflcmfiasgsaiwsilapifvpmfmllgfhpafaqilfriadssvlplapvspfvplflgflqrykpdaklgtyyslvlpypliflvvwllmllawylvglpigpgiyprls]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=abgT+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=abgT]]&nbsp;&nbsp;
 
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===Notes===
===Notes===
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Artificial expression of abgT allows the uptake of p-aminobenzoyl-glutamate (Hussein, 1998; Carter, 2007). abgAB expression catalyzes the p-aminobenzoyl-glutamate assimilation to feed p-aminobenzoate auxotrophs (Carter, 2007). The abg operon is silent and an AbgR inducer has not been found, suggesting another natural substrate (Hussein, 1998; Carter, 2007). IT (Ion Transporter) superfamily (Prakash, 2003). ST(3) structural class based on hydropathy profile (Lolkema, 2003).<ref name='LIB:EcoGene'/>




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==References==
==References==
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Latest revision as of 21:56, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

abgT

Gene Synonym(s)

ECK1332, b1336, JW5822, ydaH[1], ydaH

Product Desc.

AbgT Transporter[2][3]

p-Aminobenzoyl-glutamate transporter; membrane protein[4]

Product Synonyms(s)

predicted cryptic aminobenzoyl-glutamate transporter[1], B1336[2][1], YdaH[2][1], AbgT[2][1] , ECK1332, JW5822, ydaH, b1336

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ogt[2]

Regulation/Activity
Quick Links



        

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Notes

[back to top]


Artificial expression of abgT allows the uptake of p-aminobenzoyl-glutamate (Hussein, 1998; Carter, 2007). abgAB expression catalyzes the p-aminobenzoyl-glutamate assimilation to feed p-aminobenzoate auxotrophs (Carter, 2007). The abg operon is silent and an AbgR inducer has not been found, suggesting another natural substrate (Hussein, 1998; Carter, 2007). IT (Ion Transporter) superfamily (Prakash, 2003). ST(3) structural class based on hydropathy profile (Lolkema, 2003).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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