Phage lambda Rz:Gene: Difference between revisions

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{{Tab|Quickview|Phage lambda Rz}}{{Tab On|Gene|Phage lambda Rz}}{{Tab|Gene Product(s)|Phage lambda Rz}}{{Tab|Expression|Phage lambda Rz}}{{Tab|Evolution|Phage lambda Rz}}{{Tab|On One Page|Phage lambda Rz}}{{TabsBottom}}
{{Tab|Quickview|Phage lambda Rz}}{{Tab On|Gene|Phage lambda Rz}}{{Tab|Gene Product(s)|Phage lambda Rz}}{{Tab|Expression|Phage lambda Rz}}{{Tab|Evolution|Phage lambda Rz}}{{Tab|On One Page|Phage lambda Rz}}{{TabsBottom}}
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|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Location(s) and DNA Sequence|Location(s) and DNA Sequence]]
|{{Sub}}[[#Sequence Features|Sequence Features]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Alleles and Phenotypes |Alleles and Phenotypes]]
|{{Sub}}[[#Genetic Interactions | Genetic Interactions]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Genetic Resources  |Genetic Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
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==Nomenclature==
==Nomenclature==
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{|  class=" tableEdit Gene_nomenclature_table" 
 
|-
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!{{table_heading_style}} |Standard name
!align=left {{table_heading_style}} |Standard name
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''Phage lambda Rz''
''Phage lambda Rz''
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''Phage lambda Rz''
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''Phage lambda Rz''  
|-
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!{{table_heading_style}} |Mnemonic
!align=left {{table_heading_style}} |Mnemonic
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|-
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!{{table_heading_style}} |Synonyms
!align=left {{table_heading_style}} |Synonyms
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''Rz, lambdap76''
''Rz, lambdap76''
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''Rz, lambdap76''
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''Rz, lambdap76''
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==Location(s) and DNA Sequence==
==Location(s) and DNA Sequence==
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!Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
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NC_001416
NC_001416
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NC_001416: 45966..46427<br />{{GBrowseFigureByCoord|44966|47427|bacteriophage_lambda|NC_001416}}
NC_001416: 45966..46427<br /><gbrowseImage>
name=NC_001416:45966..46427
source=bacteriophage_lambda
preset=GeneLocation
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*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/bacteriophage_lambda/?q=NC_001416:44966..47427 GBrowse(bacteriophage_lambda)]
{{GBrowseLink|bacteriophage_lambda|NC_001416|45966|46427|Gbrowse (Bacteriophage lambda)}}
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*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/bacteriophage_lambda/?plugin=FastaDumper&name=NC_001416:45966..46427&plugin_action=Go FASTA Dump]
{{GBrowseFastaLink|bacteriophage_lambda|NC_001416|45966|46427|FASTA Dump}}  
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NC_001416
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&nbsp;
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NC_001416: 45966..46427<br />{{GBrowseFigureByCoord|44966|47427|bacteriophage_lambda|NC_001416}}  
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*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/bacteriophage_lambda/?q=NC_001416:44966..47427 GBrowse(bacteriophage_lambda)]
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*[http://dimer.tamu.edu/cgi-bin/gb/gbrowse/bacteriophage_lambda/?plugin=FastaDumper&name=NC_001416:45966..46427&plugin_action=Go FASTA Dump]
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==Sequence Features==
==Sequence Features==
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!Feature type!!Location!!Description
!|Feature Type!!Strain!!Genomic Location!!Evidence!!Reference!!Notes
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==Alleles and Phenotypes==
==Alleles and Phenotypes==
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|- {{table_heading_style}}
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!Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!CGSC Mutation ID #
!|Allele!!Nt change(s)!!AA change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
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RzQ100am
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CAG to TAG at codon 100
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Glutamine to stop
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Cell Shape
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Lysis block when media is supplemented with millimolar concentrations of divalent cations.  Lytic cycle terminates in the formation of meta-stable cells with a spherical morphology.
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PMID:10628848
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===Notes===
===Notes===


==Genetic Interactions==
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===Notes===


==Genetic Resources==
==Genetic Resources==
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==Accessions in Other Databases==
==Accessions in Other Databases==
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|- {{table_heading_style}}
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene Genbank] ([[Genbank|EcoliWiki Page]])
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..R46b171748058c&page=104401&pagename={{FULLPAGENAMEE}}&type=0&template=Gene_accessions_table edit table]</span> || ||
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[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=&term=2703481 Genbank:2703481] 
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[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene Genbank] ([[Genbank|EcoliWiki Page]])
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[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=&term=2703481 Genbank:2703481] 
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==Links==
==Links==
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==References==
==References==
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__NOTOC__
__NOTOC__
[[Category:Gene List:Phage lambda]]</protect></noinclude>
===Categories===
[[Category:Gene List:Phage lambda]]

Latest revision as of 20:35, 19 September 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Location(s) and DNA Sequence Sequence Features Alleles and Phenotypes Genetic Interactions Genetic Resources Accessions Links References Suggestions

Nomenclature

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Standard name

Phage lambda Rz

Mnemonic
Synonyms

Rz, lambdap76

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See Help:Gene_nomenclature for help with entering information in the Gene Nomenclature table.

Notes

Location(s) and DNA Sequence

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

NC_001416

NC_001416: 45966..46427
<gbrowseImage> name=NC_001416:45966..46427 source=bacteriophage_lambda preset=GeneLocation </gbrowseImage>

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See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Notes

Sequence Features

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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Feature Type Strain Genomic Location Evidence Reference Notes
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See Help:Gene_sequence_features for help in entering sequence features in EcoliWiki.

Notes

Alleles and Phenotypes

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See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Allele Nt change(s) AA change(s) Phenotype: Type Phenotype: Description Reference Availability Comments

RzQ100am

CAG to TAG at codon 100

Glutamine to stop

Cell Shape

Lysis block when media is supplemented with millimolar concentrations of divalent cations. Lytic cycle terminates in the formation of meta-stable cells with a spherical morphology.

PMID:10628848[1]


edit table

See Help:Gene_alleles for how to enter or edit alleles and phenotypes in EcoliWiki.

Notes

Genetic Interactions

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Interactor Interaction Allele Score(s) Reference(s) Accessions Notes
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Notes

Genetic Resources

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See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
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See Help:Gene_resources for help entering information into the Genetic Resources table.

Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Notes

Links

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Name URL Comments
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See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

<protect>

References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Zhang, N & Young, R (1999) Complementation and characterization of the nested Rz and Rz1 reading frames in the genome of bacteriophage lambda. Mol. Gen. Genet. 262 659-67 PubMed

Categories

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