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{{Tab On|Quickview|fumB}}{{Tab|Gene|fumB}}{{Tab|Gene Product(s)|fumB}}{{Tab|Expression|fumB}}{{Tab|Evolution|fumB}}{{Tab|On One Page|fumB}}{{TabsBottom}}
{{Tab On|Quickview|fumB}}{{Tab|Gene|fumB}}{{Tab|Gene Product(s)|fumB}}{{Tab|Expression|fumB}}{{Tab|Evolution|fumB}}{{Tab|On One Page|fumB}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[fumB:Gene|''fumB]]'' (synonyms: ''ECK4115, b4122, JW4083'')<ref name='LIB:Riley_2006'/>
''fumB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[fumB:Gene_Product(s)|FumB product]]<ref name='LIB:Riley_2006'/>: anaerobic class I fumarate hydratase (fumarase B)<ref name='LIB:Riley_2006'/>, B4122<ref name='LIB:EcoCyc10.6'/>, FumB<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:fumarase B|fumarase B]]<ref name='LIB:EcoCyc10.6'/>
''ECK4115, b4122, JW4083''<ref name='LIB:Riley_2006'/>, JW4083''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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fumarase B monomer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
fumarase B<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:fumarase B|fumarase B]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Fumarase B, anaerobic<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''anaerobic class I fumarate hydratase (fumarase B)<ref name='LIB:Riley_2006'/>, B4122<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FumB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK4115, JW4083, b4122''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:dcuB-fumB|dcuB-fumB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:txn_units:fumB|fumB]]<ref name='LIB:EcoCyc10.6'/>, OP00218  
transcription unit(s): [[:Category:Txn_unit:dcuB-fumB|dcuB-fumB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:fumB|fumB]]<ref name='LIB:EcoCyc10.6'/>, OP00218  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fumB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10357]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000350&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fumB&loc=MG1655%3A4345349..4343703,W3110%3A4352004..4350358,REL606%3A4326041..4324395,DH10B%3A4445711..4444065,BW2952%3A4282438..4284084]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4282438&end=4284084&gene=fumB&aa=msnkpfiyqapfpmgkdnteyylltsdyvsvadfdgetilkvepealtllaqqafhdasfmlrpahqkqvaailhdpeasendkyvalqflrnseiaakgvlptcqdtgtaiivgkkgqrvwtgggdeetlskgvyntyiednlrysqnaaldmykevntgtnlpaqidlyavdgdeykflcvakgggsanktylyqetkalltpgklknflvekmrtlgtaacppyhiafviggtsaetnlktvklasahyydelptegnehgqafrdvqleqelleeaqklglgaqfggkyfahdirvirlprhgascpvgmgvscsadrnikakinregiwieklehnpgqyipqelrqagegeavkvdlnrpmkeilaqlsqypvstrlsltgtiivgrdiahaklkelidagkelpqyikdhpiyyagpaktpagypsgslgpttagrmdsyvdllqshggsmimlakgnrsqqvtdachkhggfylgsiggpaavlaqqsikhlecvaypelgmeaiwkievedfpafilvddkgndffqqivnkqcanctk]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fumB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fumB]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
FumB is required for anaerobic D-tartrate utilization and fumB mutants have reduced D-tartrate dehydratase activity (Kim, 2007).<ref name='LIB:EcoGene'/>
 




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==References==
==References==
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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fumB

Gene Synonym(s)

ECK4115, b4122, JW4083[1], JW4083

Product Desc.

fumarase B[2][3];

Component of fumarase B[2][3]

Fumarase B, anaerobic[4]

Product Synonyms(s)

anaerobic class I fumarate hydratase (fumarase B)[1], B4122[2][1], FumB[2][1] , ECK4115, JW4083, b4122

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dcuB-fumB[2], fumB[2], OP00218

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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FumB is required for anaerobic D-tartrate utilization and fumB mutants have reduced D-tartrate dehydratase activity (Kim, 2007).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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