rhaS:Quickview: Difference between revisions

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{{Tab On|Quickview|rhaS}}{{Tab|Gene|rhaS}}{{Tab|Gene Product(s)|rhaS}}{{Tab|Expression|rhaS}}{{Tab|Evolution|rhaS}}{{Tab|On One Page|rhaS}}{{TabsBottom}}
{{Tab On|Quickview|rhaS}}{{Tab|Gene|rhaS}}{{Tab|Gene Product(s)|rhaS}}{{Tab|Expression|rhaS}}{{Tab|Evolution|rhaS}}{{Tab|On One Page|rhaS}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[rhaS:Gene|''rhaS]]'' (synonyms: ''ECK3898, b3905, JW3876, rhaC, rhaC2'')<ref name='LIB:Riley_2006'/>
''rhaS''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[rhaS:Gene_Product(s)|RhaS product]]<ref name='LIB:Riley_2006'/>: DNA-binding transcriptional activator, L-rhamnose-binding<ref name='LIB:Riley_2006'/>, B3905<ref name='LIB:EcoCyc10.6'/>, RhaS<ref name='LIB:EcoCyc10.6'/>, positive regulator for rhaBAD operon<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:RhaS transcriptional activator|RhaS transcriptional activator]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Complex:RhaS-L-rhamnose transcriptional activator|RhaS-L-rhamnose transcriptional activator]]<ref name='LIB:EcoCyc10.6'/>
''ECK3898, b3905, JW3876, rhaC, rhaC2''<ref name='LIB:Riley_2006'/>, rhaC2''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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RhaS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
RhaS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;


Component of [[:Category:Complex:RhaS transcriptional activator|RhaS transcriptional activator]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; [[:Category:Complex:RhaS-L-rhamnose transcriptional activator|RhaS-L-rhamnose transcriptional activator]]<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


Transcriptional activator for rhaBAD and rhaT, AraC family<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA-binding transcriptional activator, L-rhamnose-binding<ref name='LIB:Riley_2006'/>, B3905<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhaS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, positive regulator for rhaBAD operon<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3898, JW3876, rhaC2, b3905''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:rhaSR|rhaSR]]<ref name='LIB:EcoCyc10.6'/>, OP00087, rha  
transcription unit(s): [[:Category:Txn_unit:rhaSR|rhaSR]]<ref name='LIB:EcoCyc10.6'/>, OP00087, rha  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rhaS&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10843]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000834&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rhaS&loc=MG1655%3A4095759..4096595,W3110%3A3538945..3538109,REL606%3A4077218..4078054,DH10B%3A4195456..4196292,BW2952%3A3985428..3986264]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3985428&end=3986264&gene=rhaS&aa=mtvlhsvdffpsgnasvaieprlpqadfpehhhdfheivivehgtgihvfngqpytitggtvcfvrdhdrhlyehtdnlcltnvlyrspdrfqflaglnqllpqeldgqypshwrvnhsvlqqvrqlvaqmeqqegendlpstasreilfmqlllllrksslqenlensasrlnlllawledhfadevnwdavadqfslslrtlhrqlkqqtgltpqrylnrlrlmkarhllrhseasvtdiayrcgfsdsnhfstlfrrefnwsprdirqgrdgflq]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhaS+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rhaS]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:55, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rhaS

Gene Synonym(s)

ECK3898, b3905, JW3876, rhaC, rhaC2[1], rhaC2

Product Desc.

RhaS[2][3];

Component of RhaS transcriptional activator[2][3]; RhaS-L-rhamnose transcriptional activator[2][3]

Transcriptional activator for rhaBAD and rhaT, AraC family[4]

Product Synonyms(s)

DNA-binding transcriptional activator, L-rhamnose-binding[1], B3905[2][1], RhaS[2][1], positive regulator for rhaBAD operon[2][1] , ECK3898, JW3876, rhaC2, b3905

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhaSR[2], OP00087, rha

Regulation/Activity
Quick Links



        

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Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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