apbE:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''yojL, ECK2206, b2214, JW5368, yojK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yojL, ECK2206, b2214, JW5368, yojK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, yojK''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted thiamine biosynthesis lipoprotein<ref name='LIB:Riley_2006'/>, B2214<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted thiamine biosynthesis lipoprotein<ref name='LIB:Riley_2006'/>, B2214<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2206, JW5368, yojK, yojL, b2214''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=apbE&s=search PortEco search(apbE)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=apbE&loc=MG1655:2309556..2308501,W3110:2314868..2313813,BW2952:2194306..2195361 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2194306&end=2195361&gene=apbE&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=apbE+AND+escherichia+coli Pubmed(apbE)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=apbE Textpresso(apbE)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=apbE&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG12073]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001980&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=apbE&loc=MG1655%3A2309556..2308501,W3110%3A2314868..2313813,BW2952%3A2194306..2195361]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2194306&end=2195361&gene=apbE&aa=meisftrvallaaalffvgcdqkpqpakthatevtvlegktmgtfwrasipgidakrsaelkekiqtqldaddqllstykkdsalmrfndsqslspwpvseamadivttslrigaktdgamditvgplvnlwgfgpeqqpvqipsqeqidamkaktglqhltvinqshqqylqkdlpdlyvdlstvgegyaadhlarlmeqegisrylvsvggalnsrgmngeglpwrvaiqkptdkenavqavvdinghgistsgsyrnyyeldgkrlshvidpqtgrpiehnlvsvtviaptaleadawdtglmvlgpekakevvrreglavymitkegdsfktwmspqfksflvsekn]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=apbE+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=apbE]]&nbsp;&nbsp;


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Latest revision as of 21:53, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

apbE

Gene Synonym(s)

yojL, ECK2206, b2214, JW5368, yojK[1][2], yojK

Product Desc.

predicted thiamine biosynthesis lipoprotein[2][3]

Lipoprotein involved in thiamine synthesis; primarily characterized in Salmonella[4]

Product Synonyms(s)

predicted thiamine biosynthesis lipoprotein[1], B2214[2][1], YojK[2][1], YojL[2][1], ApbE[2][1] , ECK2206, JW5368, yojK, yojL, b2214

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yojL[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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ApbE probably helps convert aminoimidazole ribotide AIR, a purine intermediate, to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine HMP moiety of thiamine. Localized to the inner membrane, periplasmic location, but not membrane anchor, is required for function. First 19 aa are a type II signal peptide.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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