dapB:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
touch QV table
touch
 
(One intermediate revision by the same user not shown)
Line 23: Line 23:
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  
*  
****************************************************************************************** -->{{Quickview_table_help}}
****************************************************************************************** -->
{|  id="B49aee336cc4d4"  class=" tableEdit New_Quickview_Table"   
{|  id="B49aee336cc4d4"  class=" tableEdit New_Quickview_Table"   


Line 33: Line 33:
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK0032, b0031, JW0029''<ref name='LIB:Riley_2006'/>
''ECK0032, b0031, JW0029''<ref name='LIB:Riley_2006'/>, JW0029''
|-
|-
!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
Line 45: Line 45:
!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
dihydrodipicolinate reductase<ref name='LIB:Riley_2006'/>, B0031<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DapB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''dihydrodipicolinate reductase<ref name='LIB:Riley_2006'/>, B0031<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DapB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0032, JW0029, b0031''
|-
|-
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
Line 65: Line 65:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://porteco.org/AjaxSearch.jsp?searchString=dapB&s=search PortEco search(dapB)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=dapB&loc=MG1655:28374..29195,W3110:28374..29195,DH10B:28374..29195,REL606:32446..33267,BW2952:28374..29195 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=28374&end=29195&gene=dapB&aa=mhdanirvaiagaggrmgrqliqaalalegvqlgaaleregssllgsdagelagagktgvtvqssldavkddfdvfidftrpegtlnhlafcrqhgkgmvigttgfdeagkqairdaaadiaivfaanfsvgvnvmlkllekaakvmgdytdieiieahhrhkvdapsgtalamgeaiahaldkdlkdcavysreghtgervpgtigfatvragdivgehtamfadigerleithkassrmtfangavrsalwlsgkesglfdmrdvldlnnl Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dapB+AND+escherichia+coli Pubmed(dapB)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dapB Textpresso(dapB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=dapB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10206]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000200&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=dapB&loc=MG1655%3A28374..29195,W3110%3A28374..29195,DH10B%3A28374..29195,REL606%3A32446..33267,BW2952%3A28374..29195]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=28374&end=29195&gene=dapB&aa=mhdanirvaiagaggrmgrqliqaalalegvqlgaaleregssllgsdagelagagktgvtvqssldavkddfdvfidftrpegtlnhlafcrqhgkgmvigttgfdeagkqairdaaadiaivfaanfsvgvnvmlkllekaakvmgdytdieiieahhrhkvdapsgtalamgeaiahaldkdlkdcavysreghtgervpgtigfatvragdivgehtamfadigerleithkassrmtfangavrsalwlsgkesglfdmrdvldlnnl]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dapB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dapB]]&nbsp;&nbsp;


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Latest revision as of 21:51, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

dapB

Gene Synonym(s)

ECK0032, b0031, JW0029[1], JW0029

Product Desc.

DapB[2][3];

Component of dihydrodipicolinate reductase[2][3]

Dihydrodipicolinate reductase[4]

Product Synonyms(s)

dihydrodipicolinate reductase[1], B0031[2][1], DapB[2][1] , ECK0032, JW0029, b0031

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dapB[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


A dapB mutant is not in the Keio collection; DAP auxotrophs require added DAP to grow and since no DAP was added during mutant construction, no auxotrophic mutants were recovered; dapB is not an essential gene (Baba, 2006).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=dapB:Quickview&oldid=1397413"