ligB:Quickview: Difference between revisions

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{{Tab On|Quickview|ligB}}{{Tab|Gene|ligB}}{{Tab|Gene Product(s)|ligB}}{{Tab|Expression|ligB}}{{Tab|Evolution|ligB}}{{Tab|On One Page|ligB}}{{TabsBottom}}
{{Tab On|Quickview|ligB}}{{Tab|Gene|ligB}}{{Tab|Gene Product(s)|ligB}}{{Tab|Expression|ligB}}{{Tab|Evolution|ligB}}{{Tab|On One Page|ligB}}{{TabsBottom}}
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!{{table_heading_style}} |Gene Name
!align=left {{table_heading_style}} |Standard Name
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[[ligB:Gene|''ligB]]'' (synonyms: ''ECK3637, b3647, JW3622, yicF'')<ref name='LIB:Riley_2006'/>
''ligB''
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!{{table_heading_style}} |Product(s)  
!align=left {{table_heading_style}} |Gene Synonym(s)
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[[ligB:Gene_Product(s)|LigB product]]<ref name='LIB:Riley_2006'/>: DNA ligase, NAD(+)-dependent<ref name='LIB:Riley_2006'/>, B3647<ref name='LIB:EcoCyc10.6'/>, LigB<ref name='LIB:EcoCyc10.6'/>, YicF<ref name='LIB:EcoCyc10.6'/>
''ECK3637, b3647, JW3622, yicF''<ref name='LIB:Riley_2006'/>, yicF''
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!{{table_heading_style}} |Description
!align=left {{table_heading_style}} |Product Desc.
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DNA ligase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
DNA ligase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


 
DNA ligase B, NAD(+)-dependent<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
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''DNA ligase, NAD(+)-dependent<ref name='LIB:Riley_2006'/>, B3647<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LigB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YicF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3637, JW3622, yicF, b3647''
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!align=left {{table_heading_style}} |Function from GO
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<GO_nr />
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!{{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!{{table_heading_style}} |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:txn_units:ligB|ligB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ligB|ligB]]<ref name='LIB:EcoCyc10.6'/>  
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!{{table_heading_style}} |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=ligB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11334]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001305&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=ligB&loc=MG1655%3A3819193..3817511,W3110%3A3819245..3820927,DH10B%3A3916771..3915089,REL606%3A3757845..3759527,BW2952%3A3705838..3707520]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3705838&end=3707520&gene=ligB&aa=mmmkvwmailigilcwqssvwavcpawsparaqeeisrlqqqikqwdddywkegksevedgvydqlsarltqwqrcfgseprdvmmpplngavmhpvahtgvrkmvdknalslwmrersdlwvqpkvdgvavtlvyrdgklnkaisrgnglkgedwtqkvslisavpqtvsgplanstlqgeiflqreghiqqqmgginarakvaglmmrqddsdtlnslgvfvwawpdgpqlmsdrlkelatagftltqtytravknadevarvrnewwkaelpfvtdgvvvraakepesrhwlpgqaewlvawkyqpvaqvaevkaiqfavgksgkisvvaslapvmlddkkvqrvnigsvrrwqewdiapgdqilvslagqgipriddvvwrgaertkptppenrfnsltcyfasdvcqeqfisrlvwlgakqvlgldgigeagwralhqthrfehifswllltpeqlqntpgiaksksaqlwhqfnlarkqpftrwvmamgipltraalnasderswsqllfsteqfwqqlpgtgsgrarqviewkenaqikklgswlaaqqitgfep]]&nbsp;&nbsp;  [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ligB+AND+escherichia+coli]]&nbsp;&nbsp;  [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ligB]]&nbsp;&nbsp;
 
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==Notes==
===Notes===
{{BacktoTop}}
 
 
 




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==References==
==References==
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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

ligB

Gene Synonym(s)

ECK3637, b3647, JW3622, yicF[1], yicF

Product Desc.

DNA ligase[2][3]

DNA ligase B, NAD(+)-dependent[4]

Product Synonyms(s)

DNA ligase, NAD(+)-dependent[1], B3647[2][1], LigB[2][1], YicF[2][1] , ECK3637, JW3622, yicF, b3647

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ligB[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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