skp:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''hlpA, ECK0177, b0178, JW0173, firA, ompH''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''hlpA, ECK0177, b0178, JW0173, firA, ompH''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>, ompH''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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periplasmic chaperone<ref name='LIB:Riley_2006'/>, B0178<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Skp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HLP-I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''periplasmic chaperone<ref name='LIB:Riley_2006'/>, B0178<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Skp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HlpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HLP-I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0177, hlpA, JW0173, ompH, b0178''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=skp&s=search PortEco search(skp)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=skp&loc=MG1655:200482..200967,W3110:200482..200967,DH10B:174586..175071,BW2952:200481..200966 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=200481&end=200966&gene=skp&aa=mkkwllaaglglalatsaqaadkiaivnmgslfqqvaqktgvsntlenefkgraselqrmetdlqakmkklqsmkagsdrtklekdvmaqrqtfaqkaqafeqdrarrsneergklvtriqtavksvansqdidlvvdanavaynssdvkditadvlkqvk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=skp+AND+escherichia+coli Pubmed(skp)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=skp Textpresso(skp)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=skp&s=search]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=skp&loc=MG1655%3A200482..200967,W3110%3A200482..200967,DH10B%3A174586..175071,BW2952%3A200481..200966]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=200481&end=200966&gene=skp&aa=mkkwllaaglglalatsaqaadkiaivnmgslfqqvaqktgvsntlenefkgraselqrmetdlqakmkklqsmkagsdrtklekdvmaqrqtfaqkaqafeqdrarrsneergklvtriqtavksvansqdidlvvdanavaynssdvkditadvlkqvk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=skp+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=skp]]&nbsp;&nbsp;


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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

skp

Gene Synonym(s)

hlpA, ECK0177, b0178, JW0173, firA, ompH[1][2], ompH

Product Desc.

periplasmic chaperone[3][2]

Periplasmic molecular chaperone for outer membrane proteins; trimeric[4]

Product Synonyms(s)

periplasmic chaperone[1], B0178[3][1], Skp[3][1], OmpH[3][1], HlpA[3][1], HLP-I[3][1] , ECK0177, hlpA, JW0173, ompH, b0178

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE[3], ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, hlpA-lpxD-fabZ-lpxA[3]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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The reported binding to DNA was an artifact due to the cationic nature of Skp.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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