lptB:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF12399 PF12399  Branched-chain amino acid ATP-binding cassette transporter]
[http://pfam.janelia.org/family/PF12399 PF12399  Branched-chain amino acid ATP-binding cassette transporter]
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[[EcoCyc]]
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EcoCyc:EG11680
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11680
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001623
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1631
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010512
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:35, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Dictyostelium discoideum

  • DDB0219981 (score: 1.000; bootstrap: 52%)
  • DDB0215337 (score: 0.090)
  • DDB0201653 (score: 0.088)
  • DDB0191529 (score: 0.074)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00014344001 (score: 1.000; bootstrap: 57%)
  • GSTENP00014343001 (score: 0.105)
  • GSTENP00020877001 (score: 0.101)
  • GSTENP00038511001 (score: 0.091)
  • GSTENP00014937001 (score: 0.051)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000041613 (score: 1.000; bootstrap: 95%)

From Inparanoid:20070104

Shigella flexneri

YHBG

From SHIGELLACYC

E. coli O157

YHBG

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00005 ABC transporter

Panther (EcoliWiki Page)

PTHR24220:SF15

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Pfam (EcoliWiki Page)

PF12399 Branched-chain amino acid ATP-binding cassette transporter

EcoCyc

EcoCyc:EG11680

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11680

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001623

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1631

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010512

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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