ligA:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03119 PF03119  NAD-dependent DNA ligase C4 zinc finger domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03120 PF03120  NAD-dependent DNA ligase OB-fold domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00533 PF00533  BRCA1 C Terminus (BRCT) domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01653 PF01653  NAD-dependent DNA ligase adenylation domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[[EcoCyc]]
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EcoCyc:EG10534
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10534
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000527
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0529
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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[http://pfam.janelia.org/family/PF00533 PF00533  BRCA1 C Terminus (BRCT) domain] 
ASAP:ABE-0007938
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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!|Name!!URL!!Comments
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Latest revision as of 08:34, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Dictyostelium discoideum

  • DDB0232267 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

LIG

From SHIGELLACYC

E. coli O157

LIG

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03119 NAD-dependent DNA ligase C4 zinc finger domain

Pfam (EcoliWiki Page)

PF03120 NAD-dependent DNA ligase OB-fold domain

Pfam (EcoliWiki Page)

PF00533 BRCA1 C Terminus (BRCT) domain

Pfam (EcoliWiki Page)

PF01653 NAD-dependent DNA ligase adenylation domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:47781

Superfamily (EcoliWiki Page)

SUPERFAMILY:50249

Superfamily (EcoliWiki Page)

SUPERFAMILY:52113

Panther (EcoliWiki Page)

PTHR11107:SF5

Superfamily (EcoliWiki Page)

SUPERFAMILY:56091

EcoCyc

EcoCyc:EG10534

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10534

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000527

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0529

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007938

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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