ydiB:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01488 PF01488  Shikimate / quinate 5-dehydrogenase]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF08501 PF08501  Shikimate dehydrogenase substrate binding domain]
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[[EcoCyc]]
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EcoCyc:EG11234
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11234
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001212
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1216
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0005651
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:32, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT3G06350 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5ZCV1 (score: 1.000; bootstrap: 100%)
  • Q5ZCU7 (score: 0.914)

From Inparanoid:20070104

Shigella flexneri

YDIB

From SHIGELLACYC

E. coli O157

YDIB

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Superfamily (EcoliWiki Page)

SUPERFAMILY:53223

Pfam (EcoliWiki Page)

PF01488 Shikimate / quinate 5-dehydrogenase

Pfam (EcoliWiki Page)

PF08501 Shikimate dehydrogenase substrate binding domain

EcoCyc

EcoCyc:EG11234

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11234

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001212

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1216

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0005651

Escherichia coli str. K-12 substr. MG1655


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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