nfuA:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
deleting Pfam from accessions table on evolution pages
touch
 
(3 intermediate revisions by the same user not shown)
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="W46ac0086c02aa"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="W46ac0086c02aa"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 104: Line 104:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="M46ac008c15958"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="M46ac008c15958"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF01521 PF01521  Iron-sulphur cluster biosynthesis]
|
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF01106 PF01106  NifU-like domain]
|
|-  
|-  
|
|
Line 128: Line 142:
|
|
   
   
|-
|
[[EcoCyc]]
|
EcoCyc:G7748
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG12935
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120004291
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB2771
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0011144
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 147: Line 196:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="B46a83fdd3c7dc"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="B46a83fdd3c7dc"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT3G20970 (score: 1.000; bootstrap: 100%)
  • AT1G51390 (score: 0.698)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050417-365 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-366 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050417-346 (score: 0.439)
  • ZDB-GENE-050417-345 (score: 0.439)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0186594 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q5WMY1 (score: 1.000; bootstrap: 49%)

From Inparanoid:20070104

Shigella flexneri

YHGI

From SHIGELLACYC

E. coli O157

YHGI

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01521 Iron-sulphur cluster biosynthesis

Pfam (EcoliWiki Page)

PF01106 NifU-like domain

Panther (EcoliWiki Page)

PTHR10072:SF26

Superfamily (EcoliWiki Page)

SUPERFAMILY:89360

Superfamily (EcoliWiki Page)

SUPERFAMILY:117916

EcoCyc

EcoCyc:G7748

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG12935

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004291

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2771

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0011144

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=nfuA:Evolution&oldid=1391471"