kefF:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF02525 PF02525  Flavodoxin-like fold]
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[[EcoCyc]]
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EcoCyc:EG11568
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11568
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001520
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1528
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000159
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:29, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000000402 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000034446 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000022018 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000039940 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000032251 (score: 0.410)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000013713 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000030044 (score: 0.362)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-030131-1226 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-1145 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000020892 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000337773 (score: 1.000; bootstrap: 100%)
  • ENSP00000319788 (score: 0.359)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000011126 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000025865 (score: 0.360)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000003283 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:103187 (score: 1.000; bootstrap: 100%)
  • MGI:104513 (score: 0.320)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000030178 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000014148 (score: 0.361)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000017175 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000024141 (score: 0.338)
  • ENSRNOP00000033201 (score: 0.303)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145774 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

YABF

From SHIGELLACYC

E. coli O157

YABF

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF02525 Flavodoxin-like fold

Superfamily (EcoliWiki Page)

SUPERFAMILY:52218

Panther (EcoliWiki Page)

PTHR10204:SF0

EcoCyc

EcoCyc:EG11568

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11568

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001520

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1528

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000159

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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