gltB:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00310 PF00310  Glutamine amidotransferases class-II]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01493 PF01493  GXGXG motif]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF04898 PF04898  Glutamate synthase central domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01645 PF01645  Conserved region in glutamate synthase]
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[[EcoCyc]]
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EcoCyc:EG10403
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10403
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000396
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0398
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0010545
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:36, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000013025 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000028277 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G04140 (score: 1.000; bootstrap: 68%)
  • AT2G41220 (score: 0.692)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00025132 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00012326 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0036663 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA21956-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • P23225 (score: 1.000; bootstrap: 100%)
  • Q69RJ0 (score: 0.857)
  • O04187 (score: 0.498)
  • O04186 (score: 0.103)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDL171C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAPB1E77 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

GLTB

From SHIGELLACYC

E. coli O157

GLTB

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00310 Glutamine amidotransferases class-II

Pfam (EcoliWiki Page)

PF01493 GXGXG motif

Pfam (EcoliWiki Page)

PF04898 Glutamate synthase central domain

Pfam (EcoliWiki Page)

PF01645 Conserved region in glutamate synthase

Superfamily (EcoliWiki Page)

SUPERFAMILY:51395

Panther (EcoliWiki Page)

PTHR11938:SF1

Superfamily (EcoliWiki Page)

SUPERFAMILY:56235

Superfamily (EcoliWiki Page)

SUPERFAMILY:69336

EcoCyc

EcoCyc:EG10403

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10403

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000396

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0398

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0010545

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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