alkA:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00730 PF00730  HhH-GPD superfamily base excision DNA repair protein]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF06029 PF06029  AlkA N-terminal domain]
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[[EcoCyc]]
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EcoCyc:EG11222
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG11222
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120001200
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB1204
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0006848
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:33, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000002170 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q688W2 (score: 1.000; bootstrap: 100%)
  • Q9XHW2 (score: 0.423)
  • Q688U5 (score: 0.423)
  • Q656W2 (score: 0.164)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAPB24D34c (score: 1.000; bootstrap: 100%)
  • SPBC23G71 (score: 0.287)

From Inparanoid:20070104

Shigella flexneri

ALKA

From SHIGELLACYC

E. coli O157

ALKA

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00730 HhH-GPD superfamily base excision DNA repair protein

Superfamily (EcoliWiki Page)

SUPERFAMILY:48150

Superfamily (EcoliWiki Page)

SUPERFAMILY:55945

Pfam (EcoliWiki Page)

PF06029 AlkA N-terminal domain

EcoCyc

EcoCyc:EG11222

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG11222

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120001200

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB1204

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0006848

Escherichia coli str. K-12 substr. MG1655


Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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