thrA:Evolution: Difference between revisions

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!|Organism!!Homologs (Statistics)!!Comments
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!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF00696 PFAM:PF00696]
[http://pfam.janelia.org/family/PF01842 PF01842  ACT domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF01842 PF01842  ACT domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00696 PF00696  Amino acid kinase family]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03447 PF03447  Homoserine dehydrogenase, NAD binding domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00742 PF00742  Homoserine dehydrogenase]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55021 SUPERFAMILY:55021]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55021 SUPERFAMILY:55021]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=55347 SUPERFAMILY:55347]
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[[EcoCyc]]
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EcoCyc:EG10998
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EcoGene]]
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EcoGene:EG10998
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[RegulonDB]]
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RegulonDB:ECK120000987
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[EchoBASE]]
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EchoBASE:EB0991
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
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[[ASAP]]
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ASAP:ABE-0000008
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''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


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Latest revision as of 08:29, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT4G19710 (score: 1.000; bootstrap: 100%)
  • AT1G31230 (score: 0.669)

From Inparanoid:20070104

Oryza gramene

  • P49079 (score: 1.000; bootstrap: 100%)
  • Q6ZD10 (score: 0.834)
  • Q69LG7 (score: 0.772)
  • P93402 (score: 0.768)
  • P49080 (score: 0.766)
  • Q6ZD09 (score: 0.644)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YJR139C (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC7763 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000017647 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

THRA

From SHIGELLACYC

E. coli O157

THRA

From ECOO157CYC

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Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01842 ACT domain

Pfam (EcoliWiki Page)

PF01842 ACT domain

Pfam (EcoliWiki Page)

PF00696 Amino acid kinase family

Pfam (EcoliWiki Page)

PF03447 Homoserine dehydrogenase, NAD binding domain

Pfam (EcoliWiki Page)

PF00742 Homoserine dehydrogenase

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Panther (EcoliWiki Page)

PTHR21499:SF6

Superfamily (EcoliWiki Page)

SUPERFAMILY:53633

Superfamily (EcoliWiki Page)

SUPERFAMILY:55021

Superfamily (EcoliWiki Page)

SUPERFAMILY:55021

Superfamily (EcoliWiki Page)

SUPERFAMILY:55347

EcoCyc

EcoCyc:EG10998

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10998

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000987

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0991

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000008

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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